CF504672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.103e-17 Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 29 KYKNPTMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------IDAFPHKGNLHLVFEFMETDL 337 +Y ++D K+ D++ ++GEGTYG VYKA D TG+ VA+KK+RL +KEG TA+REIK+L++L II + +D KG +LVFE+M+ DL Sbjct: 686 RYGETKEKDIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDL 798
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 53 EVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------IDAFPHKGNLHLVFEFMETDL 337 ++D K+ D++ ++GEGTYG VYKA D TG+ VA+KK+RL +KEG TA+REIK+L++L II + +D KG +LVFE+M+ DL Sbjct: 694 DIDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDL 798
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVI 349 ++Y E +GEGTYGVVYKA G+T A+KKIRL K+ EG+ TA+REI +LKELK +I++L D K L LVFE ++ DL+ ++ Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLL 90
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.212e-16 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = 2 Query: 80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVI 349 ++Y E +GEGTYGVVYKA G+T A+KKIRL K+ EG+ TA+REI +LKELK +I++L D K L LVFE ++ DL+ ++ Sbjct: 2 EKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLL 90
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 42/87 (48.28%), Postives = 62/87 (71.26%), Query Frame = 2 Query: 80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340 ++Y K E +GEGTYGVVYK T +T+A+KKIRL ++ EGV TA+REI LLKE++ +I+ L D + ++LVFE+++ DL+ Sbjct: 2 EQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHKEKCIYLVFEYLDLDLK 88
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK12_RAT (Cell division protein kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 29 KYKNPTMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------IDAFPHKGNLHLVFEFMETDL 337 +Y E D K+ D++ ++GEGTYG VYKA D TG+ VA+KK+RL +KEG TA+REIK+L++L ++ + +D KG +LVFE+M+ DL Sbjct: 704 RYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDL 816
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK12_MOUSE (Cell division protein kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 29 KYKNPTMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------IDAFPHKGNLHLVFEFMETDL 337 +Y E D K+ D++ ++GEGTYG VYKA D TG+ VA+KK+RL +KEG TA+REIK+L++L ++ + +D KG +LVFE+M+ DL Sbjct: 704 RYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDL 816
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 43/87 (49.43%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340 D + K E +GEGTYGVVYK + +T VA+KKIRL + EGV TA+REI LLKEL+ P+++ L + L+L+FEF+ DL+ Sbjct: 14 DDFTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQHPNVVGLEAVIMQENRLYLIFEFLSYDLK 100
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2_AJECA (Cell division control protein 2 OS=Ajellomyces capsulata GN=CDC2 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.582e-16 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 80 DRYLKREVLGEGTYGVVYKAID-TKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGN-LHLVFEFMETDLE 340 + Y K E +GEGTYGVVYKA D T + VA+KKIRL + EGV TA+REI LLKE+ P+I+ L++ G+ L+LVFEF++ DL+ Sbjct: 2 ENYQKIEKIGEGTYGVVYKARDLTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMHDPNIVRLLNIVHADGHKLYLVFEFLDLDLK 90
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.699e-16 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 29 KYKNPTMAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------IDAFPHKGNLHLVFEFMETDL 337 +Y E D K+ D++ ++GEGTYG VYKA D TG+ VA+KK+RL +KEG TA+REIK+L++L ++ + +D KG +LVFE+M+ DL Sbjct: 708 RYGERRQTESDWGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDL 820 The following BLAST results are available for this feature:
BLAST of CF504672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504672 ID=CF504672; Name=CF504672; organism=Citrus sinensis; type=EST; length=349bpback to top |