CF504672

Overview
NameCF504672
Unique NameCF504672
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length349
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig808 contig Csv1_Contig808:1..349. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.648e-15
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            +Y K E +GEGTYG V+KA +  T + VA+K++RL    EGV  +ALREI LLKELK  +I+ L D       L LVFEF + DL+
Sbjct:    3 KYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLK 88          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDC2C_ANTMA (Cell division control protein 2 homolog C OS=Antirrhinum majus GN=CDC2C PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.683e-15
Identity = 46/97 (47.42%), Postives = 65/97 (67.01%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELID------AFPHKGNLHLVFEFMETDLETVI 349
            ++Y K E +GEGTYG VYKA++  TGQ VA+KK RL   +EGV  TALRE+ LL+ L +S +++ L+       A   K  L+LVFE+++TDL+  I
Sbjct:    2 EKYEKLEKVGEGTYGKVYKALEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSLYVVRLLSVEHVDCAKNGKPLLYLVFEYLDTDLKKFI 98          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: MK15_RAT (Mitogen-activated protein kinase 15 OS=Rattus norvegicus GN=Mapk15 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 2
Query:   47 MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS-PHIIELIDAFPHKG--NLHLVFEFMETDLETVI 349
            M   ++ + V+ RYL +  LG+G YG+V+KA+D +TG+ VAIKKI    + +       REI LL+E    P+II L+D  P K   +++LVFE M+TDL  VI
Sbjct:    1 MCAAEVDRHVSQRYLIKRRLGKGAYGIVWKAMDRRTGEVVAIKKIFDAFRDQTDAQRTFREIMLLREFGGHPNIIRLLDVIPAKNDRDIYLVFESMDTDLNAVI 104          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 46/103 (44.66%), Postives = 64/103 (62.14%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKS----------PHIIELID---AFPHKGNLHLVFEFMETDLETVI 349
            ++Y K E +GEGTYG VYKA++  TG+ VA+KK RL   +EG+  TALREI LL+ L             H+I+  D   +   K NL+LVFE+++TDL+  I
Sbjct:    2 EKYEKLEKVGEGTYGKVYKAMEKTTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSQSIYIVRLLCVEHVIQSKDSTVSHSPKSNLYLVFEYLDTDLKKFI 104          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CKB11_ORYSJ (Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica GN=CDKB1-1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKEL-KSPHIIELIDAFPHKGN----LHLVFEFMETDLETVI 349
            ++Y K E +GEGTYG VYKA D  TGQ VA+KK RL   +EG+  TALREI +L+ L +S +++ L+       N    L+LVFEF++TDL+  +
Sbjct:    2 EKYEKLEKVGEGTYGKVYKAQDRATGQLVALKKTRLEMDEEGIPPTALREISILRLLSQSLYVVRLLSVEQATKNGKPVLYLVFEFLDTDLKKFV 96          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 43/102 (42.16%), Postives = 62/102 (60.78%), Query Frame = 2
Query:   80 DRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIEL----------------IDAFPHKGNLHLVFEFMETDL 337
            D + K E +GEGTYG VY A + KTG+ VA+KKIR+  ++EG   TA+REIK+LK+L   ++I L                 D   +KG +++VFE+M+ DL
Sbjct:   24 DCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDL 125          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK9_HUMAN (Cell division protein kinase 9 OS=Homo sapiens GN=CDK9 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-----AFPH---KGNLHLVFEFMETDL 337
            +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK  +++ LI+     A P+   KG+++LVF+F E DL
Sbjct:   18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL 110          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK9_BOVIN (Cell division protein kinase 9 OS=Bos taurus GN=CDK9 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.134e-14
Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELID-----AFPH---KGNLHLVFEFMETDL 337
            +Y K   +G+GT+G V+KA   KTGQ VA+KK+ +  +KEG   TALREIK+L+ LK  +++ LI+     A P+   KG+++LVF+F E DL
Sbjct:   18 KYEKLAKIGQGTFGEVFKAKHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL 110          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.481e-14
Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 2
Query:   83 RYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            +Y K E +GEGTYG V+K  +  T + VA+K++RL +  EGV  +ALREI LLKELK  +I+ LID       L LVFE  + DL+
Sbjct:    3 KYDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKKLTLVFEHCDQDLK 88          
BLAST of CF504672 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.934e-14
Identity = 41/88 (46.59%), Postives = 58/88 (65.91%), Query Frame = 2
Query:   77 ADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLE 340
            + ++ + E LGEGTY  VYK  +  TGQ VA+K+I L  + EG   TA+REI L+KELK  +I+ L D    +  L+LVFE+M+ DL+
Sbjct:    4 SSQFQQLEKLGEGTYATVYKGRNRTTGQLVALKEINLDSE-EGTPSTAIREISLMKELKHENIVTLYDVIHTENKLNLVFEYMDKDLK 90          
The following BLAST results are available for this feature:
BLAST of CF504672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
CDK5_XENLA6.648e-1550.00Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDC2C_ANTMA8.683e-1547.42Cell division control protein 2 homolog C OS=Antir... [more]
MK15_RAT1.134e-1443.27Mitogen-activated protein kinase 15 OS=Rattus norv... [more]
CKB12_ARATH1.134e-1444.66Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
CKB11_ORYSJ1.134e-1447.37Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp... [more]
CDKC2_ARATH1.134e-1442.16Cyclin-dependent kinase C-2 OS=Arabidopsis thalian... [more]
CDK9_HUMAN1.134e-1446.24Cell division protein kinase 9 OS=Homo sapiens GN=... [more]
CDK9_BOVIN1.134e-1446.24Cell division protein kinase 9 OS=Bos taurus GN=CD... [more]
CDK5_DROME1.481e-1448.84Cell division protein kinase 5 homolog OS=Drosophi... [more]
PHO85_YARLI1.934e-1446.59Negative regulator of the PHO system OS=Yarrowia l... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-161 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504672 ID=CF504672; Name=CF504672; organism=Citrus sinensis; type=EST; length=349bp
CCTAAAAGATAAAATATACAATTACCAGAAATATAAAAATCCGACGATGG
CAGAAGTCGATTTGTCGAAGAAAGTCGCTGATAGATACCTGAAACGTGAG
GTTCTTGGTGAAGGTACATACGGTGTCGTTTACAAAGCCATTGATACTAA
GACAGGACAGACTGTTGCTATAAAAAAAATTCGGCTTGGGAAGCAAAAGG
AGGGGGTGAATTTTACAGCACTAAGAGAAATAAAGCTGCTGAAAGAACTT
AAAAGTCCACATATAATTGAGTTGATTGATGCATTCCCTCACAAGGGGAA
CTTGCATCTTGTTTTTGAGTTTATGGAGACTGACCTCGAAACGGTTATT
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