CF504694
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.008e-16 Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNY 181 K W F ++ LP DL++RG+AVED +PHG++L I+DYPYA DGL++W A+K WVT+Y Sbjct: 594 KDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIKSWVTDY 650
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX1_ORYSJ (Lipoxygenase 1 OS=Oryza sativa subsp. japonica GN=Os03g0699700 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.622e-16 Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNY 181 K+W F +GLP DLI+RGIA++DP +P +KL I+DYPYA DGL +W A++QWVT Y Sbjct: 591 KNWNFTEQGLPDDLIKRGIAIKDPSSPSKVKLLIKDYPYATDGLAIWQAIEQWVTEY 647
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX6_ARATH (Lipoxygenase 6, choloroplastic OS=Arabidopsis thaliana GN=LOX6 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.473e-16 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 2 Query: 5 YDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVNHLLSRSK 208 Y WRFD EGLP DL+RRG+A ED A G++L I+DYPYA DGL +W A+K V +YV H S SK Sbjct: 647 YKSMWRFDMEGLPADLVRRGMAEEDSSAECGVRLVIDDYPYAADGLLIWKAIKDLVESYVKHFYSDSK 714
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.700e-15 Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVN 187 K+W F + LP DLI+RG+A+EDP +P G+KL +EDYPYA DGL++W +K WV +YV+ Sbjct: 595 KNWVFTEQALPADLIKRGMAIEDPSSPCGVKLVVEDYPYAVDGLEIWAIIKTWVQDYVS 653
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.220e-15 Identity = 32/58 (55.17%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 184 K W F ++ LP DL++RG+AV DP +P+ ++L IEDYPYANDGL +W A++QW T Y+ Sbjct: 598 KDWSFADQALPDDLVKRGVAVPDPASPYKVRLLIEDYPYANDGLAVWHAIEQWATEYL 655
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.899e-15 Identity = 33/59 (55.93%), Postives = 47/59 (79.66%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVN 187 K+W F ++ LP DLI+R +AV+D +P+GL+L IEDYPYA DGL++W A+K WV +YV+ Sbjct: 598 KYWVFTDQALPNDLIKRNMAVKDSSSPYGLRLLIEDYPYAVDGLEIWTAIKTWVQDYVS 656
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.787e-15 Identity = 33/57 (57.89%), Postives = 43/57 (75.44%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNY 181 K W F + LP DL++RG+AVED +PHG++L I DYPYA DGL++W A+K WVT Y Sbjct: 593 KDWVFPEQALPADLLKRGVAVEDLSSPHGIRLLILDYPYAVDGLEIWAAIKSWVTEY 649
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.787e-15 Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 184 K+W F +GLP DLI+RG+AVED +P+ ++L I+DYPYA DGL++W A++QWV Y+ Sbjct: 594 KNWNFTEQGLPADLIKRGVAVEDATSPYKVRLLIKDYPYAADGLEIWHAIEQWVGEYL 651
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.439e-14 Identity = 31/58 (53.45%), Postives = 46/58 (79.31%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 184 K W+F +GLP DLI+RG+AVEDP +P+ ++L + DYPYA DGL +W A++Q+V+ Y+ Sbjct: 590 KDWKFTEQGLPDDLIKRGMAVEDPSSPYKVRLLVSDYPYAADGLAIWHAIEQYVSEYL 647
BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.078e-13 Identity = 29/58 (50.00%), Postives = 45/58 (77.59%), Query Frame = 2 Query: 11 KHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYV 184 K+W+F + LP DL++RG+AV DP +P+ ++L I+DYPYA DGL +W A+++WV Y+ Sbjct: 601 KNWKFTEQALPVDLVKRGVAVPDPTSPYNVRLLIKDYPYAVDGLVIWWAIERWVGEYL 658 The following BLAST results are available for this feature:
BLAST of CF504694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504694 ID=CF504694; Name=CF504694; organism=Citrus sinensis; type=EST; length=217bpback to top |