CF504694

Overview
NameCF504694
Unique NameCF504694
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length217
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504694 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.317e-11
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 2 
Query:    5 YDKHWRFDNEGLPKDLIRRGIAVEDPKAPHGLKLNIEDYPYANDGLDLWDALKQWVTNYVN 187
            Y   W+F+ E LP+DLI RG+AV        L+L I+DYPYA+DGL +W ++KQW ++YV+
Sbjct:  628 YGAAWQFNTEALPEDLINRGLAVRRDDGE--LELAIKDYPYADDGLLIWGSIKQWASDYVD 686
The following BLAST results are available for this feature:
BLAST of CF504694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX23_HORVU3.317e-1149.18Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-184 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_D04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504694 ID=CF504694; Name=CF504694; organism=Citrus sinensis; type=EST; length=217bp
CATCTATGACAAGCACTGGAGGTTTGACAATGAAGGACTCCCCAAGGACC
TTATTAGGAGGGGAATAGCTGTTGAAGATCCAAAAGCTCCTCATGGCCTT
AAGCTAAACATCGAAGACTACCCATATGCCAACGATGGGCTCGATCTCTG
GGATGCCTTAAAACAATGGGTTACTAACTATGTGAACCACCTATTATCCC
GATCCAAGCCTTGTAGA
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