CF504716

Overview
NameCF504716
Unique NameCF504716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length247
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.126e-31
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRK 246          

HSP 2 Score: 75.485 bits (184), Expect = 2.126e-31
Identity = 37/44 (84.09%), Postives = 41/44 (93.18%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRK+KKD++ N RALRRLRT+CERAKRTLSS AQTTIEI
Sbjct:  239 FVQEFKRKNKKDLTTNARALRRLRTACERAKRTLSSAAQTTIEI 282          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_PARBA (Heat shock 70 kDa protein 2 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-2 PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.768e-31
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVNEFKRK 246          

HSP 2 Score: 76.6406 bits (187), Expect = 2.768e-31
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKD+S N RALRRLRT+CERAKRTLSS AQT+IEI
Sbjct:  239 FVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEI 282          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.113e-31
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIE+GIFEVKATAGDTHLGGEDFDNRMVNH     ++K
Sbjct:  206 TFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRK 250          

HSP 2 Score: 74.7146 bits (182), Expect = 6.113e-31
Identity = 36/44 (81.82%), Postives = 41/44 (93.18%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RALRRLRT+CERAKRTLSS++Q +IEI
Sbjct:  243 FVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEI 286          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.958e-31
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVK+TAGDTH GGEDFDNR+VNH     ++K
Sbjct:  201 TFDVSLLTIEEGIFEVKSTAGDTHFGGEDFDNRLVNHFVNEFKRK 245          

HSP 2 Score: 76.6406 bits (187), Expect = 7.958e-31
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKD+S N RALRRLRT+CERAKRTLSS AQT+IEI
Sbjct:  238 FVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEI 281          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.039e-30
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNH     ++K
Sbjct:   72 TFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVNEFKRK 116          

HSP 2 Score: 74.7146 bits (182), Expect = 1.039e-30
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKD++ N RALRRLRT+CERAKRTLSS AQT+IEI
Sbjct:  109 FVNEFKRKHKKDLTTNARALRRLRTACERAKRTLSSAAQTSIEI 152          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 1.349e-30
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFD+R+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRK 246          

HSP 2 Score: 74.7146 bits (182), Expect = 1.349e-30
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F+QEFKRK+KKDI+GN RA+RRLRT+CERAKRTLSS+AQ +IEI
Sbjct:  239 FIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEI 282          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 2.288e-30
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFD+R+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRK 246          

HSP 2 Score: 73.559 bits (179), Expect = 2.288e-30
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F QEFKRK+KKDI+GN RA+RRLRT+CERAKRTLSS+AQ +IEI
Sbjct:  239 FAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEI 282          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 77.0258 bits (188), Expect = 2.288e-30
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  201 TFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRK 245          

HSP 2 Score: 74.7146 bits (182), Expect = 2.288e-30
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F+QEFKRK+KKD+S N RALRRLRT+CERAKRTLSS+AQT++EI
Sbjct:  238 FIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEI 281          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 77.0258 bits (188), Expect = 2.288e-30
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLL+IE+GIFEVKATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  201 TFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRK 245          

HSP 2 Score: 74.7146 bits (182), Expect = 2.288e-30
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F+QEFKRK+KKD+S N RALRRLRT+CERAKRTLSS+AQT++EI
Sbjct:  238 FIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEI 281          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.979e-30
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNRMVNH  A  ++K
Sbjct:  204 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRK 248          

HSP 2 Score: 71.633 bits (174), Expect = 2.979e-30
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F+ EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q +IEI
Sbjct:  241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEI 284          
The following BLAST results are available for this feature:
BLAST of CF504716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_USTMA2.126e-3182.22Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP72_PARBA2.768e-3180.00Heat shock 70 kDa protein 2 OS=Paracoccidioides br... [more]
HSP71_ORYLA6.113e-3180.00Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP71_PARBA7.958e-3177.78Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_PENCI1.039e-3080.00Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP72_SCHPO1.349e-3080.00Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_SCHPO2.288e-3080.00Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP71_YEAST2.288e-3077.78Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP72_YEAST2.288e-3077.78Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP7C_BOVIN2.979e-3080.00Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-206 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504716 ID=CF504716; Name=CF504716; organism=Citrus sinensis; type=EST; length=247bp
GTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAAGTT
AAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAACAG
AATGGTTAACCACCTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGAC
ATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAG
AGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTG
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