CF504716

Overview
NameCF504716
Unique NameCF504716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length247
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.171e-29
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI++GIFEV+ATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  204 TFDVSILTIDDGIFEVEATAGDTHLGGEDFDNRLVNHFVEEFKRK 248

HSP 2 Score: 72.4034 bits (176), Expect = 4.171e-29
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q ++EI
Sbjct:  241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.430e-29
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIE+GIF++K+TAGDTHLGGEDFDNRMVNH  A  ++K
Sbjct:  204 TFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIAEFKRK 248

HSP 2 Score: 69.707 bits (169), Expect = 5.430e-29
Identity = 33/44 (75.00%), Postives = 38/44 (86.36%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F+ EFKRKHKKDIS N RA+RRL T+CERAKRTLSS+ Q +IEI
Sbjct:  241 FIAEFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.430e-29
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIE+GIFEVKATAGDTHLG EDFDNR+VNH     ++K
Sbjct:  208 TFDVSLLTIEDGIFEVKATAGDTHLGAEDFDNRLVNHFVQEFKRK 252

HSP 2 Score: 70.8626 bits (172), Expect = 5.430e-29
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRKHKKD+SG  R  RRLRT+CERAKRTLSS+AQT+IEI
Sbjct:  245 FVQEFKRKHKKDLSGKARP-RRLRTACERAKRTLSSSAQTSIEI 287
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.430e-29
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI++GIFEVKATAGDTHLGGEDFDNR+V+H     ++K
Sbjct:  204 TFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRK 248

HSP 2 Score: 72.4034 bits (176), Expect = 5.430e-29
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q ++EI
Sbjct:  241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.430e-29
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI++GIFEVKATAGDTHLGGEDFDNR+V+H     ++K
Sbjct:  204 TFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRK 248

HSP 2 Score: 72.4034 bits (176), Expect = 5.430e-29
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q ++EI
Sbjct:  241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.430e-29
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI++GIFEVKATAGDTHLGGEDFDNR+V+H     ++K
Sbjct:  204 TFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRK 248

HSP 2 Score: 72.4034 bits (176), Expect = 5.430e-29
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q ++EI
Sbjct:  241 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.432e-29
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKDI GN RALRRLRT+CERAKRTLSS++Q ++EI
Sbjct:  242 FVDEFKRKHKKDIMGNQRALRRLRTACERAKRTLSSSSQASVEI 285

HSP 2 Score: 72.4034 bits (176), Expect = 5.432e-29
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLL+I++G+FEV ATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  205 TFDVSLLSIDDGVFEVLATAGDTHLGGEDFDNRLVNHFVDEFKRK 249
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.068e-29
Identity = 32/45 (71.11%), Postives = 39/45 (86.67%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+L IE+GIFE+K+TAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  204 TFDVSILAIEDGIFEIKSTAGDTHLGGEDFDNRLVNHFVDEFKRK 248

HSP 2 Score: 72.7886 bits (177), Expect = 7.068e-29
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKDIS N RALRRLRT+CERAKRTLS++ Q ++EI
Sbjct:  241 FVDEFKRKHKKDISSNKRALRRLRTACERAKRTLSASTQASVEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.068e-29
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVK+TAGDT LGGE+FDNR+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKSTAGDTQLGGEEFDNRLVNHFVNEFKRK 246

HSP 2 Score: 73.1738 bits (178), Expect = 7.068e-29
Identity = 36/44 (81.82%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRK+KKD+S N RALRRLRT+CERAKRTLSS AQT+IEI
Sbjct:  239 FVNEFKRKNKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEI 282
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HS71L_RAT (Heat shock 70 kDa protein 1-like OS=Rattus norvegicus GN=Hspa1l PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.070e-29
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI++GIFEVKATAGDTHLGGEDFDNR+V+H     ++K
Sbjct:  206 TFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRK 250

HSP 2 Score: 72.0182 bits (175), Expect = 7.070e-29
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q  +EI
Sbjct:  243 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEI 286
The following BLAST results are available for this feature:
BLAST of CF504716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS71B_BOSMU4.171e-2973.33Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HSP7C_ICTPU5.430e-2975.56Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP70_BLAEM5.430e-2977.78Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP71_RAT5.430e-2973.33Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HS71B_MOUSE5.430e-2973.33Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE5.430e-2973.33Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HS7C3_DICDI5.432e-2979.55Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP70_HYDMA7.068e-2971.11Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_TRIRU7.068e-2975.56Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HS71L_RAT7.070e-2973.33Heat shock 70 kDa protein 1-like OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-206 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504716 ID=CF504716; Name=CF504716; organism=Citrus sinensis; type=EST; length=247bp
GTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAAGTT
AAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAACAG
AATGGTTAACCACCTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGAC
ATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAG
AGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTG
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