CF504716

Overview
NameCF504716
Unique NameCF504716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length247
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.840e-27
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 3 
Query:    3 TFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+L+I+EG +FEVKATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  204 TFDVSVLSIDEGSLFEVKATAGDTHLGGEDFDNRLVNHFAEEFKRK 249

HSP 2 Score: 70.4774 bits (171), Expect = 2.840e-27
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F +EFKRKHK DI GN RALRRLRT+CERAKRTLSS+ + ++EI
Sbjct:  242 FAEEFKRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEI 285
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.694e-27
Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+L+IE+GIFEVK+TAGDTHLGGEDFD+R+VNH     ++K
Sbjct:  205 TFDVSILSIEDGIFEVKSTAGDTHLGGEDFDSRLVNHFVEEFKRK 249

HSP 2 Score: 67.781 bits (164), Expect = 3.694e-27
Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 1 
Query:  115 FVQEFKRKHK-KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHK KD++ N RA+RRLRT+CERAKRTLSS+AQ  IEI
Sbjct:  242 FVEEFKRKHKGKDLTTNKRAVRRLRTACERAKRTLSSSAQANIEI 286
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.695e-27
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQK 134
            TFDVS+LTIE+GIFEVK+TAGDTHL GEDFDNRMVNH  A  ++
Sbjct:  204 TFDVSILTIEDGIFEVKSTAGDTHL-GEDFDNRMVNHFVAEFKR 246

HSP 2 Score: 70.0922 bits (170), Expect = 3.695e-27
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKR  KKD++ NPRALRRLRT+CERAKRTLSS++Q +IEI
Sbjct:  240 FVAEFKRNDKKDLASNPRALRRLRTACERAKRTLSSSSQASIEI 283
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.812e-27
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNRMVN      + K
Sbjct:  207 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNRFVEEFKGK 251

HSP 2 Score: 67.3958 bits (163), Expect = 4.812e-27
Identity = 31/44 (70.45%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFK KHK+D +GN RA+RRLRT+CERA+RTLSS+ Q +IEI
Sbjct:  244 FVEEFKGKHKRDNAGNKRAVRRLRTACERARRTLSSSTQASIEI 287
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.152e-27
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRK KKD+S N RALRRLRT+CERAKRTLSS+ + TIEI
Sbjct:  240 FVEEFKRKFKKDLSKNARALRRLRTACERAKRTLSSSTEATIEI 283

HSP 2 Score: 69.3218 bits (168), Expect = 8.152e-27
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 3 
Query:    3 TFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI+EG +FEV+ATAGDTHLGGEDFDNRMV H     ++K
Sbjct:  202 TFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRMVAHFVEEFKRK 247
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.152e-27
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRK KKD+S N RALRRLRT+CERAKRTLSS+ + TIEI
Sbjct:  240 FVEEFKRKFKKDLSKNARALRRLRTACERAKRTLSSSTEATIEI 283

HSP 2 Score: 69.3218 bits (168), Expect = 8.152e-27
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 3 
Query:    3 TFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI+EG +FEV+ATAGDTHLGGEDFDNRMV H     ++K
Sbjct:  202 TFDVSILTIDEGSLFEVRATAGDTHLGGEDFDNRMVAHFVEEFKRK 247
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 3.046e-26
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLL+I+EG+FEVKATAGDTHLGGEDFD+R+VN L    ++K
Sbjct:  202 TFDVSLLSIDEGVFEVKATAGDTHLGGEDFDSRLVNFLAEEFKRK 246

HSP 2 Score: 64.6994 bits (156), Expect = 3.046e-26
Identity = 31/42 (73.81%), Postives = 39/42 (92.86%), Query Frame = 1 
Query:  121 QEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            +EFKRK+KKD++ N R+LRRLRT+ ERAKRTLSS+AQT+IEI
Sbjct:  241 EEFKRKNKKDLTTNQRSLRRLRTAAERAKRTLSSSAQTSIEI 282
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.069e-26
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIEEGIFEVK+T+ DTHLGGEDFDNRMV H     ++K
Sbjct:  204 TFDVSVLTIEEGIFEVKSTSRDTHLGGEDFDNRMVTHSSPEFKRK 248

HSP 2 Score: 66.6254 bits (161), Expect = 3.069e-26
Identity = 32/41 (78.05%), Postives = 36/41 (87.80%), Query Frame = 1 
Query:  124 EFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            EFKRKHKKDI+ N RA+RRLRT+CERAKRTLSS+ Q  IEI
Sbjct:  244 EFKRKHKKDITPNKRAVRRLRTACERAKRTLSSSTQAKIEI 284
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP7A_DROSI (Heat shock 70 kDa protein cognate 1 (Fragments) OS=Drosophila simulans GN=Hsc70-1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.096e-26
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIE+G FEVKATAGDTHLG EDFDNR+VNHL    Q+K
Sbjct:  106 TFDVSVLTIEDG-FEVKATAGDTHLGREDFDNRLVNHLVQEFQRK 149

HSP 2 Score: 66.6254 bits (161), Expect = 3.096e-26
Identity = 32/43 (74.42%), Postives = 37/43 (86.05%), Query Frame = 1 
Query:  118 VQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            VQEF+RKH KD+  N RALRRLRT+CERAKRTLSS+ Q +IEI
Sbjct:  143 VQEFQRKHGKDLGQNKRALRRLRTACERAKRTLSSSTQASIEI 185
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.713e-26
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V H     ++K
Sbjct:  206 TFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVAHFTEEFKRK 250

HSP 2 Score: 67.3958 bits (163), Expect = 6.713e-26
Identity = 35/45 (77.78%), Postives = 39/45 (86.67%), Query Frame = 1 
Query:  115 FVQEFKRKHK-KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F +EFKRK+K KD+S N RALRRLRT+CERAKRTLSS AQ TIEI
Sbjct:  243 FTEEFKRKNKGKDLSSNLRALRRLRTACERAKRTLSSAAQATIEI 287
The following BLAST results are available for this feature:
BLAST of CF504716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7B_DROME2.840e-2771.74Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP70_ECHGR3.694e-2771.11Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
HSP70_BRUMA3.695e-2777.27Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP70_CHICK4.812e-2775.56Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP72_ANOAL8.152e-2777.27Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL8.152e-2777.27Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP74_YEAST3.046e-2673.33Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP72_PARLI3.069e-2673.33Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP7A_DROSI3.096e-2677.78Heat shock 70 kDa protein cognate 1 (Fragments) OS... [more]
HSP74_TRYBB6.713e-2671.11Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-206 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504716 ID=CF504716; Name=CF504716; organism=Citrus sinensis; type=EST; length=247bp
GTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAAGTT
AAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAACAG
AATGGTTAACCACCTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGAC
ATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAG
AGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTG
back to top