CF504716

Overview
NameCF504716
Unique NameCF504716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length247
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.716e-26
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 3
Query:    3 TFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  201 TFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRK 246          

HSP 2 Score: 66.2402 bits (160), Expect = 6.716e-26
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F +EFKRK+KKD+  NPRALRRLRT+ ERAKRTLSS+ + ++EI
Sbjct:  239 FAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEI 282          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.928e-25
Identity = 32/44 (72.73%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F+QEFKRK K DIS +PRALRRLR++CERAKR LSS  QTT+E+
Sbjct:  243 FIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEV 286          

HSP 2 Score: 65.855 bits (159), Expect = 1.928e-25
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLL I+ G+FEV ATAGDTHLGGEDFDN +V H     ++K
Sbjct:  206 TFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRK 250          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.506e-25
Identity = 32/45 (71.11%), Postives = 37/45 (82.22%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDV+LLTI+ GIFEVKAT GDTHLGGEDFDNR+V H     ++K
Sbjct:  206 TFDVTLLTIDGGIFEVKATNGDTHLGGEDFDNRLVAHFTDEFKRK 250          

HSP 2 Score: 65.855 bits (159), Expect = 2.506e-25
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 1
Query:  115 FVQEFKRKHK-KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F  EFKRK+K KD+S N RALRRLRT+CERAKRTLSS AQ TIEI
Sbjct:  243 FTDEFKRKNKGKDLSTNLRALRRLRTACERAKRTLSSAAQATIEI 287          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.260e-25
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNH  +  ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVSEFKRK 246          

HSP 2 Score: 55.0694 bits (131), Expect = 3.260e-25
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1
Query:  115 FVQEFKRKHKK-DISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRK KK   +   RALRR  T+CERAKRTLSS AQT+IEI
Sbjct:  239 FVSEFKRKFKKISPAERARALRRSPTACERAKRTLSSAAQTSIEI 283          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.264e-25
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLL I++G+FEV  TAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  204 TFDVSLLAIDDGVFEVLTTAGDTHLGGEDFDNRLVNHTSLEFKRK 248          

HSP 2 Score: 63.929 bits (154), Expect = 3.264e-25
Identity = 30/41 (73.17%), Postives = 36/41 (87.80%), Query Frame = 1
Query:  124 EFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            EFKRK+KKD+  NPRA+RRLRT+ ERAKRTLSS+AQ  IE+
Sbjct:  244 EFKRKYKKDMRTNPRAIRRLRTAAERAKRTLSSSAQANIEV 284          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 9.364e-25
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV+EFKRKHKKDIS N RA+RRLRT+CERAKRTLSS+ Q ++EI
Sbjct:  239 FVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEI 282          

HSP 2 Score: 60.4622 bits (145), Expect = 9.364e-25
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI++GIFEVKATAGDT    EDFDNR+VNH     ++K
Sbjct:  203 TFDVSILTIDDGIFEVKATAGDT-TWVEDFDNRLVNHFVEEFKRK 246          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 4.548e-24
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 1
Query:  121 QEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            +EFKRK+KKD+  NPRALRRLRT+ ERAKRTLSS+ + TIEI
Sbjct:  240 EEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEI 281          

HSP 2 Score: 64.3142 bits (155), Expect = 4.548e-24
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 3
Query:    3 TFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTI+EG +FEV+ATAGDTHL GEDFDNR+V+HL    ++K
Sbjct:  201 TFDVSILTIDEGSLFEVRATAGDTHL-GEDFDNRLVSHLAEEFKRK 245          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.393e-22
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVN 110
            TFDVSLLTIEEGI+EVKA   DTHLGGEDFDNR+VN
Sbjct:  208 TFDVSLLTIEEGIYEVKAPKSDTHLGGEDFDNRLVN 243          

HSP 2 Score: 58.5362 bits (140), Expect = 1.393e-22
Identity = 33/45 (73.33%), Postives = 35/45 (77.78%), Query Frame = 1
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTL-SSTAQTTIEI 246
            FV EF   +KKDI     ALRRLRT+CERAKRTL SSTAQTTIEI
Sbjct:  245 FVTEFLTNNKKDIRWECEALRRLRTACERAKRTLSSSTAQTTIEI 289          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.359e-22
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCAR 125
            TFDVS+LTIE+GIFEVKATAGDTHLGGEDFDN +V H C R
Sbjct:  204 TFDVSILTIEDGIFEVKATAGDTHLGGEDFDNLLVEH-CVR 243          

HSP 2 Score: 53.1434 bits (126), Expect = 2.359e-22
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1
Query:  118 VQEFKRKHK-KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            V++F R +  K+IS N RALRRLRT CERAKR LSS+ Q TIE+
Sbjct:  242 VRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIEL 285          
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.359e-22
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 3
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCAR 125
            TFDVS+LTIE+GIFEVKATAGDTHLGGEDFDN +V H C R
Sbjct:  204 TFDVSILTIEDGIFEVKATAGDTHLGGEDFDNLLVEH-CVR 243          

HSP 2 Score: 53.1434 bits (126), Expect = 2.359e-22
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1
Query:  118 VQEFKRKHK-KDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            V++F R +  K+IS N RALRRLRT CERAKR LSS+ Q TIE+
Sbjct:  242 VRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIEL 285          
The following BLAST results are available for this feature:
BLAST of CF504716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP68_DROME6.716e-2669.57Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HSP75_SCHPO1.928e-2572.73Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
HSP70_TRYCR2.506e-2571.11Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_AJECA3.260e-2580.00Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP74_PARLI3.264e-2568.89Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP71_CERAE9.364e-2577.27Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_CERCA4.548e-2473.81Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP70_DAUCA1.393e-2286.11Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]
HSP70_THEPA2.359e-2282.93Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_THEAN2.359e-2282.93Heat shock 70 kDa protein OS=Theileria annulata GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-206 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504716 ID=CF504716; Name=CF504716; organism=Citrus sinensis; type=EST; length=247bp
GTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAAGTT
AAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAACAG
AATGGTTAACCACCTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGAC
ATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAG
AGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTG
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