CF504793

Overview
NameCF504793
Unique NameCF504793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length296
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: SAX1_CAEBR (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis briggsae GN=sax-1 PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.617e-15
Identity = 46/98 (46.94%), Postives = 55/98 (56.12%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N    +  D      ++K        + + W+ NRR  A+STVGTPDYIAPE
Sbjct:  207 IHRDIKPDNLLLDARGHVKLSDFGLCTGLK-------KFHRTDHYRNWPVTLPPDFISKPFESK-------RKAETWKRNRRAYAYSTVGTPDYIAPE 290          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: CBK1_YEAST (Serine/threonine-protein kinase CBK1 OS=Saccharomyces cerevisiae GN=CBK1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.642e-15
Identity = 47/110 (42.73%), Postives = 63/110 (57.27%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDE---NMAEPMDIDGCFPDTDNK---------SSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+D  GH+KLSDFGL      +     ++     DE    +++P   +    DT NK         S   S  +Q+Q W+ +RR +A+STVGTPDYIAPE
Sbjct:  472 IHRDIKPDNILIDIRGHIKLSDFGLSTGFHKTHDSNYYKKLLQQDEATNGISKPGTYNANTTDTANKRQTMVVDSISLTMSNRQQIQTWRKSRRLMAYSTVGTPDYIAPE 581          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: CBK1_PNECA (Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.642e-15
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+DK GH+KLSDFGL      +   A ++       N +     +    DT   S   S  +++  W+ NRR +A+STVGTPDYIAPE
Sbjct:  246 IHRDIKPDNILIDKTGHIKLSDFGLSMGFHKTHDNAYYQRLFESKINTSTSSTQNSLMVDT--ISLTMSSKDKIATWKKNRRIMAYSTVGTPDYIAPE 341          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: NDRB_DICDI (Probable serine/threonine-protein kinase ndrB OS=Dictyostelium discoideum GN=ndrB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.514e-14
Identity = 42/99 (42.42%), Postives = 57/99 (57.58%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHE-HKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLL+D+ GH+K+SDFGLC  L  + +  + E +K  + +N     D            + +S   +   W+  RR LA+S VGTPDY APE
Sbjct:  255 IHRDIKPDNLLIDQKGHIKVSDFGLCTGLQTNRVPTLAEIYKKYEGDNNIREED-----------QTPQSRSARFDSWKRQRRVLAYSNVGTPDYTAPE 342          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: CBK1_DEBHA (Serine/threonine-protein kinase CBK1 OS=Debaryomyces hansenii GN=CBK1 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.514e-14
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFP----DTDNKSSW--------KSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+D  GH+KLSDFGL       T  + +  K ++ EN       +G        T+N++S          S  +Q+Q W+ +RR +A+STVGTPDYIAPE
Sbjct:  435 IHRDIKPDNILIDIRGHIKLSDFGLSTGFH-KTHDSNYYKKLLEKENPHHTNPQNGNLQAPSMATNNRNSMMVDAIHLTMSNRQQMQTWRKSRRLMAYSTVGTPDYIAPE 543          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: COT1_NEUCR (Serine/threonine-protein kinase cot-1 OS=Neurospora crassa GN=cot-1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.316e-14
Identity = 47/106 (44.34%), Postives = 62/106 (58.49%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSS--------WKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+LLD+ GH+KL+DFGL      ST +    HK  D+    + +      P  DN++S          S   Q+  W+ +RR +A+STVGTPDYIAPE
Sbjct:  334 IHRDIKPDNILLDRGGHVKLTDFGL------STGF----HKLHDNNYYTQLLQGKSNKP-RDNRNSVAIDQINLTVSNRAQINDWRRSRRLMAYSTVGTPDYIAPE 428          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: CBK1_CANGA (Serine/threonine-protein kinase CBK1 OS=Candida glabrata GN=CBK1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.316e-14
Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLC----KPLDCSTLYAIHEHKTIDDENMAEPMDIDGC----FPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+D  GH+KLSDFGL     K  D +    + +      +N A     DG         D+ +   S  +Q+Q W+ +RR +A+STVGTPDYIAPE
Sbjct:  490 IHRDIKPDNILIDIRGHIKLSDFGLSTGFHKTHDSNYYKKLLQQDEATTKNGAPNDAGDGSNNRQTMIVDSINLTMSNRQQIQTWRKSRRLMAYSTVGTPDYIAPE 595          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: ORB6_SCHPO (Serine/threonine-protein kinase orb6 OS=Schizosaccharomyces pombe GN=orb6 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.630e-13
Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPL---DCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+D++GH+KLSDFGL       D S  Y     K      +     +D  +    +K       +++  W+ NRR +A+STVGTPDYIAPE
Sbjct:  213 IHRDIKPDNILIDRDGHIKLSDFGLSTGFYKQDQSASYM----KPRTGNTVKRGQMVDAIWLTMSSK-------DKMATWKKNRRVMAYSTVGTPDYIAPE 302          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: NDRA_DICDI (Probable serine/threonine-protein kinase ndrA OS=Dictyostelium discoideum GN=ndrA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.631e-13
Identity = 42/98 (42.86%), Postives = 54/98 (55.10%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KL D GLC       L++   ++ +  + M   M +    P T          E++  W+  RR LA+S VGTPDY APE
Sbjct:  232 IHRDIKPDNLLLDSKGHVKLCDLGLCTGF--HRLHSSEFYQMLVGDAMTIKMKLIEATPLTQT--------ERIASWKKARRALAYSAVGTPDYTAPE 319          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: LATS1_MOUSE (Serine/threonine-protein kinase LATS1 OS=Mus musculus GN=Lats1 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 5.797e-11
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTID--DENMAEPMDIDGCFPDTDN-KSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+D++GH+KL+DFGLC     +     H+ K     D    + MD    + D  N +   +    + +  + ++R LA S VGTP+YIAPE
Sbjct:  824 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT-----HDSKYYQSGDHPRQDSMDFSNEWGDPSNCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPE 919          
The following BLAST results are available for this feature:
BLAST of CF504793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
SAX1_CAEBR6.617e-1546.94Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
CBK1_YEAST8.642e-1542.73Serine/threonine-protein kinase CBK1 OS=Saccharomy... [more]
CBK1_PNECA8.642e-1544.90Serine/threonine-protein kinase CBK1 OS=Pneumocyst... [more]
NDRB_DICDI2.514e-1442.42Probable serine/threonine-protein kinase ndrB OS=D... [more]
CBK1_DEBHA2.514e-1442.73Serine/threonine-protein kinase CBK1 OS=Debaryomyc... [more]
COT1_NEUCR7.316e-1444.34Serine/threonine-protein kinase cot-1 OS=Neurospor... [more]
CBK1_CANGA7.316e-1443.40Serine/threonine-protein kinase CBK1 OS=Candida gl... [more]
ORB6_SCHPO1.630e-1342.57Serine/threonine-protein kinase orb6 OS=Schizosacc... [more]
NDRA_DICDI3.631e-1342.86Probable serine/threonine-protein kinase ndrA OS=D... [more]
LATS1_MOUSE5.797e-1139.60Serine/threonine-protein kinase LATS1 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-283 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-21_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504793 ID=CF504793; Name=CF504793; organism=Citrus sinensis; type=EST; length=296bp
ATTCACAGAGATATTAAACCTGACAACCTTCTTCTGGACAAAAATGGTCA
TATGAAGTTATCAGATTTTGGCCTTTGCAAGCCTCTTGACTGTTCAACCT
TATATGCAATTCATGAACATAAAACCATTGATGATGAAAATATGGCGGAA
CCAATGGATATTGATGGATGCTTTCCTGACACGGATAATAAGAGTAGTTG
GAAAAGCCCCCATGAACAGCTTCAGCATTGGCAGATGAACAGGAGGAAAC
TGGCATTTTCGACCGTGGGAACACCTGACTACATTGCTCCTGAGGT
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