CF504795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_ENCCU (Elongation factor 2 OS=Encephalitozoon cuniculi GN=EFT1 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.413e-33 Identity = 74/126 (58.73%), Postives = 95/126 (75.40%), Query Frame = 3 Query: 12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSY--KGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 M F + +M + NIRN+SVIAHVDHGKSTLTD LV A I++++ G R D+R DE +RGITIKS+ ISL++++ D L++Y +G+ NG E+LINLIDSPGHVDFSSEVTAALR+TDG Sbjct: 1 MADFHISKVHELMMNQKNIRNISVIAHVDHGKSTLTDCLVIKAKIVSKDSGGG-RYMDSREDEQQRGITIKSSAISLHFQVQKDVLEAYTKEGDTNGTEFLINLIDSPGHVDFSSEVTAALRVTDG 125
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: RIA1_SCHPO (Ribosome assembly protein 1 OS=Schizosaccharomyces pombe GN=ria1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.751e-27 Identity = 62/118 (52.54%), Postives = 85/118 (72.03%), Query Frame = 3 Query: 30 EGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 E L + + NIRN +++AHVDHGK+TL DSL+A+ GII+ ++AG VR D R DE RGIT+KS+ ISL++++ + +R +YLINLIDSPGHVDFSSEV++A R+ DG Sbjct: 7 EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRGITMKSSAISLFFKV----ISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDG 120
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.511e-27 Identity = 62/126 (49.21%), Postives = 91/126 (72.22%), Query Frame = 3 Query: 12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKG--ERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 M + +E +R+ + IRN+ ++AHVDHGK++L+DSL+A+ GII+Q +AG +R D R DE RGIT++S+ ISLY+ + L+ +G E +E+L+NLIDSPGH+DFSSEV+AA R+ DG Sbjct: 1 MPRVESETYKRLQNDPSCIRNICIVAHVDHGKTSLSDSLLASNGIISQRLAGKIRFLDARPDEQLRGITMESSAISLYFRV----LRKQEGSDEPLVSEHLVNLIDSPGHIDFSSEVSAASRLCDG 122
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: ETUD1_MOUSE (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Mus musculus GN=Eftud1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.868e-26 Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 3 Query: 12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 MV + + R+ NIRN+ V+AHVDHGK+TL D L+++ GII+ +AG +R D+R DE RGIT+KS+ ISL+Y EYLINLIDSPGHVDFSSEV+ A+RI DG Sbjct: 1 MVLSGVDKMIRLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQVRGITMKSSAISLHY------------AEGHEEYLINLIDSPGHVDFSSEVSTAVRICDG 112
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: ETUD1_HUMAN (Elongation factor Tu GTP-binding domain-containing protein 1 OS=Homo sapiens GN=EFTUD1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 6.358e-26 Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 63 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 NIRN+ V+AHVDHGK+TL D L+++ GII+ +AG +R D+R DE RGIT+KS+ ISL+Y ++ EYLINLIDSPGHVDFSSEV+ A+RI DG Sbjct: 18 NIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHYATGNE------------EYLINLIDSPGHVDFSSEVSTAVRICDG 112
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.383e-25 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 15 VKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 VK +E + +IM IRN+ +IAHVDHGK+T +DSL+AAAGII++ +AG+ + D E +RGIT+KS +SLY+E G Y+INLID+PGHVDFS +VT +LR+ DG Sbjct: 5 VKVVSE-IEKIMRNIDQIRNIGIIAHVDHGKTTTSDSLLAAAGIISERIAGEALVLDYLNVEKQRGITVKSANVSLYHEY------------EGKPYVINLIDTPGHVDFSGKVTRSLRVLDG 114
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_SULTO (Elongation factor 2 OS=Sulfolobus tokodaii GN=fusA PE=3 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 7.030e-25 Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 3 Query: 24 TAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 T E + +M +RN+ +IAHVDHGK+T +D+L+AAAGII+Q+VAG+ D + E +RGIT+K+ ISLY+E+ G Y+INLID+PGHVDFS VT +LRI DG Sbjct: 6 TVEQVLSLMKDITRVRNIGIIAHVDHGKTTTSDTLLAAAGIISQKVAGEALALDYLSVEQQRGITVKAANISLYHEI------------EGKGYVINLIDTPGHVDFSGRVTRSLRILDG 113
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 7.030e-25 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 18 KFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 K E R+MD IRN+++ AHVDHGK+TLTD+L+A AG+I+++ AG DT DE ERGITI + +S+ +E G+++LINLID+PGHVDF +VT A+R DG Sbjct: 5 KKIVEQCERLMDNPEQIRNIAIAAHVDHGKTTLTDNLLAGAGMISEDTAGQQLAMDTEEDEQERGITIDAANVSMTHEY------------EGDDHLINLIDTPGHVDFGGDVTRAMRAVDG 114
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 7.030e-25 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 18 KFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 K E R+MD IRN+++ AHVDHGK+TLTD+L+A AG+I+++ AG DT DE ERGITI + +S+ +E G+++LINLID+PGHVDF +VT A+R DG Sbjct: 5 KKIVEQCERLMDNPEQIRNIAIAAHVDHGKTTLTDNLLAGAGMISEDTAGQQLAMDTEEDEQERGITIDAANVSMTHEY------------EGDDHLINLIDTPGHVDFGGDVTRAMRAVDG 114
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.199e-24 Identity = 57/120 (47.50%), Postives = 81/120 (67.50%), Query Frame = 3 Query: 24 TAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 T E + +M +RN+ +IAHVDHGK+T +D+L+AA+GII+Q+VAG+ D + E +RGIT+K+ ISLY+E+ +G Y+INLID+PGHVDFS VT +LR+ DG Sbjct: 6 TVEQVLSLMKDVTRVRNIGIIAHVDHGKTTTSDTLLAASGIISQKVAGEALALDYLSVEQQRGITVKAANISLYHEI------------DGKGYVINLIDTPGHVDFSGRVTRSLRVLDG 113 The following BLAST results are available for this feature:
BLAST of CF504795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504795 ID=CF504795; Name=CF504795; organism=Citrus sinensis; type=EST; length=383bpback to top |