CF504795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: LEPA_CLOPE (GTP-binding protein lepA OS=Clostridium perfringens GN=lepA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 48 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 MD K IRN S++AH+DHGKSTL D L+ G + Q + ++ DT E ERGITIKS L Y+ NG EY++NLID+PGHVDF+ EV+ +L +G Sbjct: 1 MDKKKYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREM-EQQVLDTMELEKERGITIKSQAARLIYK-----------RENGEEYILNLIDTPGHVDFTYEVSRSLAACEG 100
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: LEPA_CLOP1 (GTP-binding protein lepA OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=lepA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 51/112 (45.54%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 48 MDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 MD K IRN S++AH+DHGKSTL D L+ G + Q + ++ DT E ERGITIKS L Y+ NG EY++NLID+PGHVDF+ EV+ +L +G Sbjct: 1 MDKKKYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREM-EQQVLDTMELEKERGITIKSQAARLIYK-----------RENGEEYILNLIDTPGHVDFTYEVSRSLAACEG 100
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 15 VKFTAEGLRRIMDFKHN---IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 V+ + L I+ N IRN +AHVDHGK+T TDSL+ AG+++ +VAG D E R +T+K+ ISLY+E G YLIN +D+PGHVDF+ VT +LR+ DG Sbjct: 5 VRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEY------------GGKPYLINFVDTPGHVDFTGHVTRSLRVMDG 118
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_PYRCJ (Elongation factor 2 OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=fusA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19 Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 3 Query: 15 VKFTAEGLRRIMDFKHN---IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 V+ + L I+ N IRN +AHVDHGK+T TDSL+ AG+++ +VAG D E R +T+K+ ISLY+E G YLIN +D+PGHVDF+ VT +LR+ DG Sbjct: 5 VRIVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTTDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEY------------GGKPYLINFVDTPGHVDFTGHVTRSLRVMDG 118
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: LEPA_SULDN (GTP-binding protein lepA OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=lepA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.528e-19 Identity = 49/107 (45.79%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 63 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 NIRN S+IAH+DHGKSTL D ++ G ++ G +M DT E ERGITIK+ + L Y ++G Y++NLID+PGHVDFS EV+ +L +DG Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIIQECGSVSDRELGK-QMMDTMDIEKERGITIKAQSVRLDY------------VKDGEHYILNLIDTPGHVDFSYEVSKSLASSDG 96
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_PYRAE (Elongation factor 2 OS=Pyrobaculum aerophilum GN=fusA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.528e-19 Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 6 VKMVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 V++V+ + + I IRN +AHVDHGK+T +DSL+ AG+++ +VAG D E R +T+K+ ISLY+E G YLIN +D+PGHVDF+ VT +LR+ DG Sbjct: 5 VRIVEKQLDEILAIAKNPAQIRNAGTLAHVDHGKTTTSDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEY------------GGKPYLINFVDTPGHVDFTGHVTRSLRVMDG 118
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_THENV (Elongation factor 2 OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=fusA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.832e-19 Identity = 50/126 (39.68%), Postives = 72/126 (57.14%), Query Frame = 3 Query: 6 VKMVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 V++V+ + + I IRN +AHVDHGK+T +DSL+ AG+++ +VAG D E R +T+K+ ISLY+E G YLIN +D+PGHVDF+ VT +LR+ DG Sbjct: 5 VRVVEKQLDEILAIARNPAQIRNAGTLAHVDHGKTTTSDSLLMGAGLLSPKVAGKALAMDYVPIEQLRQMTVKAANISLYFEY------------GGKPYLINFVDTPGHVDFTGHVTRSLRVMDG 118
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: LEPA_DESPS (GTP-binding protein lepA OS=Desulfotalea psychrophila GN=lepA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18 Identity = 50/107 (46.73%), Postives = 64/107 (59.81%), Query Frame = 3 Query: 63 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 NIRN S+IAH+DHGKSTL D ++ G+I D ++ D E ERGITIKS + L Y D G EY++NL+D+PGHVDFS EV+ AL +G Sbjct: 3 NIRNFSIIAHIDHGKSTLADRMIQECGVITARDFQD-QLLDNMDIERERGITIKSQTVCLPYTAKD-----------GKEYILNLVDTPGHVDFSYEVSRALTSCEG 97
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: LEPA_CAMLR (GTP-binding protein lepA OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=lepA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.284e-18 Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 3 Query: 63 NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 NIRN S+IAH+DHGKSTL D +++ G I+ + + ++ DT E ERGITIK+ + L Y+ N EY++NLID+PGHVDFS EV+ +L +G Sbjct: 3 NIRNFSIIAHIDHGKSTLADRIISECGAISDRLMSN-QVMDTMDIEKERGITIKAQSVRLNYKF------------NNEEYVLNLIDTPGHVDFSYEVSRSLASCEG 96
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: LEPA_SYNFM (GTP-binding protein lepA OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=lepA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.861e-18 Identity = 51/106 (48.11%), Postives = 64/106 (60.38%), Query Frame = 3 Query: 66 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383 IRN S+IAH+DHGKSTL D L+ AG++ D ++ D E ERGITIKS ++L Y RNG E +NLID+PGHVDFS EV+ AL +G Sbjct: 4 IRNFSIIAHIDHGKSTLADRLIQRAGLVTDRQFRD-QILDNMDIERERGITIKSQTVTLPYR-----------SRNGEEVELNLIDTPGHVDFSYEVSRALASCEG 97 The following BLAST results are available for this feature:
BLAST of CF504795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504795 ID=CF504795; Name=CF504795; organism=Citrus sinensis; type=EST; length=383bpback to top |