CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.197e-14
Identity = 44/124 (35.48%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY--CSSEGRPLYHDLNAYRVLFD 369
            VY+G L+DG      IA+K+ T H+     +F  E   + +LRH+ L +LIG+C + +E +LV EYM N TL  HLF      + W  RL   +  A  L Y    SE   ++ D+    +L D
Sbjct:  534 VYRGELEDGT----LIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLD 653          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.197e-14
Identity = 41/125 (32.80%), Postives = 75/125 (60.00%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFD 369
            V+KG LQDG++    IAVK+ +K +    ++F +E   V KL+H+ L  ++G+C +G+E++LV E++PN +L + LF   +   ++WA R ++ +  A  + Y   +   + ++ DL A  +L D
Sbjct:  335 VFKGVLQDGSE----IAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKGQLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLD 455          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.197e-14
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 1
Query:   49 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFD 369
            +AVK+     +   K++  E   +G+L H  L  L+GYC +G+ RLLV E+MP  +L  HLF    Q + WA+R++VA+  A+ L +   ++ + +Y D  A  +L D
Sbjct:  121 VAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLD 228          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.482e-14
Identity = 43/125 (34.40%), Postives = 72/125 (57.60%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG+L  G      +A+K+ ++ +    ++F +E   V KL+H+ LA L+GYC DG+E++LV E++PN +L   LF  E  + ++W  R ++   IA  + Y   + R   ++ DL A  +L D
Sbjct:  361 VYKGQLITGET----VAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLD 481          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.159e-14
Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            VYKG+L  G +    IAVK+ T+ +     +F +E   + +L+H+ L  L+G+C +GDE +LV E++PN +L   +F  E +  + W MR R+   +A  L Y    S+ R ++ DL A  +L D
Sbjct:  353 VYKGKLPGGEE----IAVKRLTRGSGQGEIEFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEGVARGLVYLHEDSQLRIIHRDLKASNILLD 473          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 7.159e-14
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VY+G+L  G +    +AVK+ +K +    ++F +EA  V KL+HK L  L+G+C +G+E++LV E++PN +L   LF    Q  ++W  R  +   IA  + Y   + R   ++ DL A  +L D
Sbjct:  359 VYRGKLSSGPE----VAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLD 479          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.159e-14
Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VYK  L DG      +AVK+         + + F  E   + K+RH  + NL+GYC +  ERLLV EYMP+ TL  HL H +   ++W+MRL++ L  A  LDY  +E  P  ++ D+    +L D
Sbjct:  533 VYKAVLSDGIH----VAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHL-HGDLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLD 653          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.350e-14
Identity = 44/125 (35.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            VYKG L +G +    +AVK+ TK +     +F +E   + +L+H+ L  L+G+C +GDE++LV E++PN +L   +F  E ++ + W MR R+   IA  L Y    S+ + ++ DL A  +L D
Sbjct:  367 VYKGTLLNGQE----VAVKRLTKGSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLD 487          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-13
Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFD 369
            VYKG+L DG +    +AVK  +  +     QF  E   +  ++H+ L  L G C +G+ RLLV EY+PN +L + LF  +   ++W+ R  + L +A  L Y   E   R ++ D+ A  +L D
Sbjct:  707 VYKGKLNDGRE----VAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLD 826          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.221e-13
Identity = 42/125 (33.60%), Postives = 73/125 (58.40%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG+L +G D    +AVK+ +K +    ++F +EA  V KL+H+ L  L+G+C + +E++L+ E++ N +L   LF  E Q+ ++W  R ++   IA  + Y   + R   ++ DL A  +L D
Sbjct:  364 VYKGKLSNGTD----VAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLD 484          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
Y1357_ARATH4.197e-1435.48Probable receptor-like protein kinase At1g30570 OS... [more]
CRK33_ARATH4.197e-1432.80Putative cysteine-rich receptor-like protein kinas... [more]
APK2A_ARATH4.197e-1435.19Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
CRK25_ARATH5.482e-1434.40Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK38_ARATH7.159e-1435.20Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK35_ARATH7.159e-1434.40Putative cysteine-rich receptor-like protein kinas... [more]
ACCR2_ARATH7.159e-1437.30Serine/threonine-protein kinase-like protein CCR2 ... [more]
CRK39_ARATH9.350e-1435.20Putative cysteine-rich receptor-like protein kinas... [more]
Y5614_ARATH1.221e-1333.87Probable LRR receptor-like serine/threonine-protei... [more]
CRK11_ARATH1.221e-1333.60Cysteine-rich receptor-like protein kinase 11 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
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