CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.595e-13
Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG    G      +AVK+ +K++    K+F +E   V KL+H+ L  L+GYC +G+E++LV E++PN +L   LF    Q  ++W+ R ++   IA  + Y   + R   ++ DL A  +L D
Sbjct:  358 VYKGTFPSGVQ----VAVKRLSKNSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLD 478          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 1.595e-13
Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L  G      +AVK+ +K +    K+F +E   V KL+H+ L  L+GYC +G+E++LV E++PN +L   LF       ++W  R ++   IA  + Y   + R   ++ DL A  +L D
Sbjct:  340 VYKGTLSSGLQ----VAVKRLSKTSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLD 460          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.083e-13
Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VY+G+LQ    N  W+A+K+          Q  +E   +  + H  L  L+G C +  + +LV EYMPN TL++HL       + W +RL VA   A+A+ Y  SS   P+YH D+ +  +L D
Sbjct:  362 VYRGKLQ----NDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLPWTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLD 481          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.721e-13
Identity = 42/125 (33.60%), Postives = 71/125 (56.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            VYKG   +G +    +AVK+ TK +     +F +E   + +L+HK L  L+G+C +GDE +LV E++PN +L   +F  + ++ + W +R R+   IA  L Y    S+ + ++ DL A  +L D
Sbjct:  362 VYKGTFPNGQE----VAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLD 482          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.721e-13
Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 1
Query:   49 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN--QTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFD 369
            IAVKK  +  W   +++  E   +G+  H  L  LIGYC + + RLLV E+MP  +L  HLF   +  Q + W +RL+VAL  A+ L +  ++E   +Y D     +L D
Sbjct:  104 IAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLD 213          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG      +AVK+    +     +F  E   + + RH+ L +LIGYC + +E +LV EYM N TL  HL+     ++ W  RL + +  A  L Y  + + +P+ H D+ +  +L D
Sbjct:  496 VYKGELHDGTK----VAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLD 615          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.553e-13
Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT--IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L DG      IAVK+ +  +    ++F  E   +  L+H  L  L G C +G E LLV EY+ N++LA+ LF  E Q   ++W+ R +V + IA+ L Y   E R   ++ D+ A  VL D
Sbjct:  681 VYKGVLADGMT----IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLD 802          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.641e-13
Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT--IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L DG      IAVK+ +  +    ++F  E   +  L+H  L  L G C +G E LLV EY+ N++LA+ LF  E Q   ++W+ R ++ + IA+ L Y   E R   ++ D+ A  VL D
Sbjct:  683 VYKGVLADGMT----IAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLD 804          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.641e-13
Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG   +G +    +AVK+ +K++     +F  E   V KL+H+ L  L+G+   G+ER+LV EYMPN +L   LF    QT ++W  R  +   IA  + Y   + R   ++ DL A  +L D
Sbjct:  367 VYKGTFSNGKE----VAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLD 487          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.061e-13
Identity = 41/125 (32.80%), Postives = 71/125 (56.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG+  +G +    +AVK+ +K +  D K+F +EA  V K++H+ LA L+G+C  GD + L+ E++ N +L   LF  E Q  ++W  R ++   IA+ + +   + +   +Y D  A  +L D
Sbjct:  367 VYKGKFSNGTE----VAVKRLSKVSGQDTKKFRNEAVLVSKIQHRNLARLLGFCLQGDGKFLIYEFVLNKSLDYFLFDPEKQGELDWTRRYKIIGGIAQGILHLHQDPQLTIIYRDFKASNILLD 487          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CRK20_ARATH1.595e-1334.40Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH1.595e-1334.40Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
WAKLO_ARATH2.083e-1334.68Wall-associated receptor kinase-like 14 OS=Arabido... [more]
CRK40_ARATH2.721e-1333.60Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
APK1B_ARATH2.721e-1336.36Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y5597_ARATH3.553e-1333.87Probable receptor-like protein kinase At5g59700 OS... [more]
Y5344_ARATH3.553e-1337.30Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH4.641e-1336.51Probable LRR receptor-like serine/threonine-protei... [more]
CRK8_ARATH4.641e-1335.20Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK22_ARATH6.061e-1332.80Cysteine-rich receptor-like protein kinase 22 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
back to top