CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13
Identity = 44/127 (34.65%), Postives = 65/127 (51.18%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKGR+  G      +AVK+    +    K+F  E   + KLRH  L +LIGYC D +E +LV EYMP+ TL  HLF  +  +   + W  RL + +  A  L Y  +  +   ++ D+    +L D
Sbjct:  539 VYKGRIDGG---ATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLD 662          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13
Identity = 42/124 (33.87%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFD 369
            VYKG L DG    R +AVK  +  +     QF  E   +  + H+ L  L G C +G+ R+LV EY+PN +L + LF  +   ++W+ R  + L +A  L Y   E   R ++ D+ A  +L D
Sbjct:  708 VYKGNLNDG----RVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLD 827          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13
Identity = 44/125 (35.20%), Postives = 66/125 (52.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG   +G +    +AVK+ +K +     +F +E   V KL+H+ L  L+G+   G ER+LV EYMPN +L   LF    Q  ++W  R +V   IA  + Y   + R   ++ DL A  +L D
Sbjct:  351 VYKGTFSNGTE----VAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLD 471          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.916e-13
Identity = 42/125 (33.60%), Postives = 69/125 (55.20%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            V+KGRL DG +    IAVK+ ++      K+F +E   V KL+H+ L  L+G+   G+E+++V EY+PN +L   LF    Q  ++W  R ++    A  + Y   + +P  ++ DL A  +L D
Sbjct:  372 VFKGRLPDGKE----IAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLD 492          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12
Identity = 40/124 (32.26%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG      +AVK+    +     +F  E   + + RH+ L +LIGYC + +E +L+ EYM N T+  HL+     ++ W  RL + +  A  L Y  + + +P+ H D+ +  +L D
Sbjct:  499 VYKGELNDGTK----VAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLD 618          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.034e-12
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            VYKG    G +    IAVK+ + ++     +F +E   + KL+H+ L  LIG+C  G+ERLLV E++ N +L + +F  E  Q ++W +R ++   IA  L Y    S  R ++ DL A  +L D
Sbjct:  371 VYKGVFPQGQE----IAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLD 491          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12
Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + +  +LV E++ N  L KH+   E+   T+ W MRLR+A+ IA AL Y  SS   P+YH D+ +  +L D
Sbjct:  467 VYKGMLVDG----RTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLD 588          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.763e-12
Identity = 41/124 (33.06%), Postives = 61/124 (49.19%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VYKG L+DG      +AVK+    +     +F  E   + KLRH+ L +LIGYC +  E +LV EYM N  L  HL+  +   + W  RL + +  A  L Y  +      ++ D+    +L D
Sbjct:  524 VYKGTLEDGTK----VAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLD 643          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            VVY+G+L +G +    +AVKK   +     K+F  E   +G +RHK L  L+GYC +G  R+LV EY+ +  L + L     Q   + W  R+++    A+AL Y   + E + ++ D+ A  +L D
Sbjct:  196 VVYRGKLVNGTE----VAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILID 318          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 41/124 (33.06%), Postives = 69/124 (55.65%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VYKG L  G      +A+K+  + +    K+F  E   + +L H+ L +L+G+C +  E++LV EYM N TL  ++     + +++AMRLR+AL  A+ + Y  +E  P   + D+ A  +L D
Sbjct:  639 VYKGTLGSGTV----VAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLD 758          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
Y5389_ARATH7.916e-1334.65Probable receptor-like protein kinase At5g38990 OS... [more]
Y1561_ARATH7.916e-1333.87Probable LRR receptor-like serine/threonine-protei... [more]
CRK15_ARATH7.916e-1335.20Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK13_ARATH7.916e-1333.60Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
HERK_ARATH1.034e-1232.26Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK29_ARATH1.034e-1235.20Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
WAKLN_ARATH1.763e-1236.51Wall-associated receptor kinase-like 18 OS=Arabido... [more]
THE1_ARATH1.763e-1233.06Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y2296_ARATH2.303e-1233.07Probable receptor-like protein kinase At2g42960 OS... [more]
Y1684_ARATH2.303e-1233.06Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
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