CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.303e-12
Identity = 43/125 (34.40%), Postives = 66/125 (52.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG   +G +    +AVK+ +K++     +F  E   V KL+H+ L  L+G+   G+ER+LV EYMPN +L   LF    Q  ++W  R  +   IA  + Y   + R   ++ DL A  +L D
Sbjct:  365 VYKGTFSNGKE----VAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLD 485          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.008e-12
Identity = 40/125 (32.00%), Postives = 67/125 (53.60%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG   +G +    +AVK+ +K +    ++F +E + V KL+H+ L  L+GY   GDE++LV E++PN +L   LF   +   ++W  R  +   I   + Y   + R   ++ DL A  +L D
Sbjct:  326 VYKGTFPNGTE----VAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKGQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLD 446          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ-TIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L +G +    +AVK+ +K +    ++F +E   V KL+H+ L  L+GYC + +E++LV E++PN +L   LF    Q  ++W  R  +   I   + Y   + R   ++ DL A  +L D
Sbjct:  381 VYKGTLVNGTE----VAVKRLSKTSEQGAQEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLD 501          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 39/124 (31.45%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG +  G      +A+KK   ++     +F  E   + +LRHK L +LIGYC +G E  L+ +YM   TL +HL++ +   + W  RL +A+  A  L Y  +  +   ++ D+    +L D
Sbjct:  535 VYKGVIDGGTK----VAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLD 654          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12
Identity = 44/126 (34.92%), Postives = 69/126 (54.76%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VYK  L DG    R +AVK+         + ++F  E   +  +RH  + NL+GY  +  ERLLV EYMP+ TL  HL H     + W++R+++A+  A+ L+Y  +E  P  ++ D+ +  VL D
Sbjct:  534 VYKAVLADG----RQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHL-HSGFSPLSWSLRIKIAMQTAKGLEYLHNEAEPRIIHGDVKSSNVLLD 654          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.131e-12
Identity = 42/127 (33.07%), Postives = 65/127 (51.18%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG++  G      +AVK+    +    K+F  E   + KLRH  L +LIGYC + +E +LV EYMP+ TL  HLF  +  +   + W  RL + +  A  L Y  +  +   ++ D+    +L D
Sbjct:  532 VYKGQIDGG---ATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLD 655          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.131e-12
Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE--NQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + +  +LV E++ N  L KH+   E  + T+ W MRLR+A+ IA AL Y  S+   P+YH D+ +  +L D
Sbjct:  458 VYKGMLVDG----RTVAVKKSKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLD 579          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 5.131e-12
Identity = 39/125 (31.20%), Postives = 67/125 (53.60%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            V+KG   +G +    +AVK+ +K +    ++F +E   V KL+H+ L  L+G+  +G+E++LV EYMPN +L   LF H     ++W  R  +   +   + Y   + R   ++ DL A  +L D
Sbjct:  349 VFKGTFPNGTE----VAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLD 469          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + +   LV E++PN  L +H+    ++ T  W MRLR+A+ IA AL Y  S+   P+YH D+ +  +L D
Sbjct:  465 VYKGMLVDG----RTVAVKKSKVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLD 585          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12
Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            +VYKGRL DG +    IAVK+ +K +     +F +E   + +L+H  L  ++G C +GDE++L+ EY+ N +L  +LF       + W  R  +   +A  L Y    S  R ++ DL    +L D
Sbjct:  541 IVYKGRLLDGKE----IAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLD 662          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CRK6_ARATH2.303e-1234.40Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
CRK24_ARATH3.008e-1232.00Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK12_ARATH3.928e-1232.80Putative cysteine-rich receptor-like protein kinas... [more]
ANX2_ARATH3.928e-1231.45Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
ACCR1_ARATH3.928e-1234.92Serine/threonine-protein kinase-like protein CCR1 ... [more]
Y5900_ARATH5.131e-1233.07Putative receptor-like protein kinase At5g39000 OS... [more]
WAKLM_ARATH5.131e-1235.71Wall-associated receptor kinase-like 17 OS=Arabido... [more]
CRK16_ARATH5.131e-1231.20Putative cysteine-rich receptor-like protein kinas... [more]
WAKLK_ARATH6.701e-1235.20Putative wall-associated receptor kinase-like 11 O... [more]
SRK6_BRAOE6.701e-1232.54Putative serine/threonine-protein kinase receptor ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
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