CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12
Identity = 41/123 (33.33%), Postives = 68/123 (55.28%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVL 363
            VYKG    G      +AVK+ +K +    ++FA+E   V KL+H+ L  L+G+C + DER+LV E++PN +L   +F    Q+ ++W  R ++   IA  + Y   + R   ++ DL A  +L
Sbjct:  365 VYKGIFPSGVQ----VAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNIL 483          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12
Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTI-EWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L  G +    IAVK+ +  +     +F +E   V KL+H+ L  L+G+C  G+ER+L+ E+  N +L  ++F    + I +W  R R+   +A  L Y   + R   ++ D+ A  VL D
Sbjct:  358 VYKGVLDYGEE----IAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLD 478          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12
Identity = 41/124 (33.06%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG +    D    +AVKK   ++     +F  E   + +LRHK L +LIGYC +G E  LV +YM   TL +HL++ +   + W  RL +A+  A  L Y  +  +   ++ D+    +L D
Sbjct:  531 VYKGVI----DGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVD 650          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12
Identity = 41/128 (32.03%), Postives = 68/128 (53.12%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            +VY+G ++  +D    IAVKK T ++    ++F  E   +G+LRHK L NL G+C   ++ LL+ +Y+PN +L   L+    ++   + W  R ++A  IA  L Y   E     ++ D+    VL D
Sbjct:  376 IVYRGNIRSSSDQ---IAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLID 500          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12
Identity = 36/124 (29.03%), Postives = 64/124 (51.61%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VY+G +  G      +A+K+    +     +F  E   + KLRH+ L +LIGYC +  E +LV +YM + T+ +HL+  +N ++ W  RL + +  A  L Y  +  +   ++ D+    +L D
Sbjct:  550 VYRGEIDGGTTK---VAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLD 670          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.752e-12
Identity = 41/125 (32.80%), Postives = 69/125 (55.20%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT-IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L +G      +AVK+ +K +    K+F +E   V KL+H+ L  L+G+C + +E++LV E++ N +L   LF    Q+ ++W  R ++   IA  + Y   + R   ++ DL A  +L D
Sbjct:  354 VYKGTLPNGVQ----VAVKRLSKTSGQGEKEFKNEVVVVAKLQHRNLVKLLGFCLEREEKILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLD 474          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 43/124 (34.68%), Postives = 65/124 (52.42%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VYKG L  G      +AVK+  + +    K+F  E   + +L H+ L +L+GYC    E++LV EYMPN +L   L     Q +  A+RLR+AL  A  + Y  +E  P  ++ D+    +L D
Sbjct:  645 VYKGHLPGG----LVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLD 764          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VY GR++DG +    +AVK     +    +QF  E   + ++ H+ L  LIGYC + D R+LV EYM N +L  HL    + + ++W  RL++A   A+ L+Y  +   P  ++ D+ +  +L D
Sbjct:  620 VYYGRMKDGKE----VAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLD 740          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLF-HWENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            +VY G ++        +AVK  ++ +    K+F  E   + ++ H  L +L+GYCC+GD   LV E++PN  L +HL     N  I W++RLR+AL  A  L+Y      P  ++ D+    +L D
Sbjct:  577 MVYHGTVKGSEQ----VAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLD 698          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11
Identity = 40/125 (32.00%), Postives = 67/125 (53.60%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE-NQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG    G      +AVK+ +K +    ++F +E   V KL+H+ L  L+GYC +G+E++LV E++ N +L   LF     + ++W  R ++   IA  + Y   + R   ++ DL A  +L D
Sbjct:  522 VYKGTFPSGVQ----VAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLD 642          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
CRK4_ARATH6.701e-1233.33Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK41_ARATH6.701e-1232.80Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
ANX1_ARATH6.701e-1233.06Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
LRKA3_ARATH8.752e-1232.03Lectin-domain containing receptor kinase A4.3 OS=A... [more]
FERON_ARATH8.752e-1229.03Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
CRK5_ARATH8.752e-1232.80Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y5374_ARATH1.143e-1134.68Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH1.143e-1132.80Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH1.143e-1132.54Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
CRK23_ARATH1.143e-1132.00Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
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