CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 43/125 (34.40%), Postives = 70/125 (56.00%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG    R +AVK+         ++F +E   + ++ H+ +  L+G C + +  +LV E++PN  L K L H  ++ T+ W +RLR+++ IA AL Y  S+   P+YH D+    +L D
Sbjct:  435 VYKGMLVDG----RIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTPVYHRDVKTTNILLD 555          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYC--SSEGRPLYHDLNAYRVLFD 369
            VVYKG L DG +    IAVK+ + H+     +F  E   + KL+HK L  L G+     ERLLV E++PN +L + LF   + + ++W  R  + + ++  L Y    SE   ++ DL +  VL D
Sbjct:  346 VVYKGHLPDGLE----IAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLD 467          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11
Identity = 43/129 (33.33%), Postives = 70/129 (54.26%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHA--WPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWE---NQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            V+KG L+DG      +AVK+  K +      K+F +E   + +L H  L NL+GYC DG ERLLV E+M + +L +HL   +    + + WA R+ +A+  A  ++Y      P  ++ D+ +  +L D
Sbjct:  519 VFKGILRDGTV----VAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILID 643          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 38/111 (34.23%), Postives = 62/111 (55.86%), Query Frame = 1
Query:   49 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWEN---QTIEWAMRLRVALYIAEALDYCSSEG-RPLYHDLNAYRVLFD 369
            IAVK+     +   +++  E   +G+L H  L  LIGYC + ++RLLV E+M   +L  HLF   N   + + W +R++VAL  A+ L +  S+  + +Y D+ A  +L D
Sbjct:   96 IAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 206          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 40/127 (31.50%), Postives = 70/127 (55.12%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT---IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L +G    + IAVK+ +  +    ++F +E   +  L+H  L  L G C +G++ +LV EY+ N+ L++ LF  +  +   ++W+ R ++ L IA+ L +   E R   ++ D+ A  VL D
Sbjct:  692 VYKGELSEG----KLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLD 814          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C +    +LV E++PN  L +HL     EN    W +RLR+A+ IA AL Y  SS   P+YH D+ +  ++ D
Sbjct:  461 VYKGMLVDG----RIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETKVPVLVYEFIPNGNLFEHLHDEFDENIMATWNIRLRIAIDIAGALSYLHSSASSPIYHRDVKSTNIMLD 582          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.546e-11
Identity = 39/125 (31.20%), Postives = 62/125 (49.60%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDY---CSSEGRPLYHDLNAYRVLFD 369
            VYK  L DG       A+K+    +     +F  E   + ++RH+ L +L GYC +  E +LV E+M   TL +HL+     ++ W  RL + +  A  LDY     SEG  ++ D+ +  +L D
Sbjct:  502 VYKAILPDGTK----AAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLD 622          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC---SSEGRPLYHDLNAYRVLFD 369
            +V++G L+D       +AVK+ +  +     +F  E   + K+RH+ L +L+GYC +  E +LV EYM    L  HL+   N  + W  RL V +  A  L Y    SS+G  ++ D+ +  +L D
Sbjct:  502 MVFRGSLKDNTK----VAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQG-IIHRDIKSTNILLD 622          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 43/126 (34.13%), Postives = 68/126 (53.97%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQ--TIEWAMRLRVALYIAEALDYC-SSEGRPLYH-DLNAYRVLFD 369
            VYKG L DG    R +AVKK         ++F +E   + ++ H+ +  L+G C + D  +LV E++PN  L +HL    +      W +RLR+A+ IA AL Y  S+   P+YH D+ +  ++ D
Sbjct:  447 VYKGMLVDG----RIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLD 568          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11
Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQT----IEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L +G +    +AVK+ ++ +     +F +E   V KL+H+ L  L+G+   G+E++LV E++PN +L   LF   N T    ++W  R  +   I   L Y   + R   ++ D+ A  +L D
Sbjct:  360 VYKGTLSNGTE----VAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLD 483          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
WAKLI_ARATH1.493e-1134.40Wall-associated receptor kinase-like 22 OS=Arabido... [more]
CRK27_ARATH1.493e-1134.92Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRI4_MAIZE1.493e-1133.33Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y3545_ARATH1.950e-1134.23Probable receptor-like protein kinase At3g55450 OS... [more]
Y1765_ARATH1.950e-1131.50Probable LRR receptor-like serine/threonine-protei... [more]
WAKLH_ARATH1.950e-1135.71Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
Y2232_ARATH2.546e-1131.20Probable receptor-like protein kinase At2g23200 OS... [more]
Y5241_ARATH3.326e-1131.75Probable receptor-like protein kinase At5g24010 OS... [more]
WAKLJ_ARATH3.326e-1134.13Wall-associated receptor kinase-like 10 OS=Arabido... [more]
CRK30_ARATH3.326e-1131.25Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
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