CF504816

Overview
NameCF504816
Unique NameCF504816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_ASPTN (Nucleolar protein 58 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=nop58 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 7.136e-45
Identity = 92/166 (55.42%), Postives = 122/166 (73.49%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFA-------EKNTTIFGEKLREQVEERL 488
            A   SMG ++S  DL N+Q  A++V+  SEYR++L  YL  +MN IAPNL +L+GE+VGARLI+HAGSLTNL+K P+STLQILGAEKALFRALKT+ +TPKYGLI+H+S IG+A+ +NKG+MAR LA K S+  R+D  A       E++    G + R  +E +L
Sbjct:  240 AADRSMGTEISQEDLENIQALAEQVVGFSEYRQQLASYLTARMNAIAPNLTALVGELVGARLIAHAGSLTNLSKSPASTLQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDALAEWDDDVTEEDKAALGTEARFNLERKL 405          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_YARLI (Nucleolar protein 58 OS=Yarrowia lipolytica GN=NOP58 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.217e-44
Identity = 91/161 (56.52%), Postives = 123/161 (76.40%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAE--KNTTIFGEKLREQVEERL 488
            A + SMG +++  DL N+Q  A +V+D +EYR++L  YL  +M  IAPNL +L+GE+VGARLI+H+GSL NLAK P+ST+QILGAEKALFRALKT+ +TPKYG+I+H+S IG+AS +NKG++AR LA K S++ R D FAE  ++  I G   R +VE RL
Sbjct:  238 AAEVSMGTEITEFDLENIQCLADQVIDFAEYREQLSNYLNARMAAIAPNLTALVGELVGARLIAHSGSLVNLAKAPASTVQILGAEKALFRALKTKHDTPKYGIIYHASLIGQASGKNKGKIARMLAAKASVSMRYDAFAEEREDVPILGIDNRIKVENRL 398          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_NEOFI (Nucleolar protein 58 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=nop58 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.542e-44
Identity = 90/166 (54.22%), Postives = 122/166 (73.49%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFA-------EKNTTIFGEKLREQVEERL 488
            A   SMG ++S  DL N+Q  A++V+  +EYR++L  YL  +MN IAPNL +L+GE+VGARLI+HAGSLTNL+K P+ST+QILGAEKALFRALKT+ +TPKYGLI+H+S IG+A+ +NKG+MAR LA K S+  R+D  A       E++    G + R  +E +L
Sbjct:  240 AADRSMGTEISQEDLENIQALAEQVVGFAEYRQQLAGYLTARMNAIAPNLTALVGELVGARLIAHAGSLTNLSKSPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDALAEWDDDATEEDKAALGTEARYNLERKL 405          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_ASPOR (Nucleolar protein 58 OS=Aspergillus oryzae GN=nop58 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.542e-44
Identity = 87/141 (61.70%), Postives = 113/141 (80.14%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAE 434
            A   SMG ++S  DL N+Q  A++V+  +EYR++L  YL  +MN IAPNL +L+GE+VGARLI+HAGSLTNL+K P+STLQILGAEKALFRALKT+ +TPKYGLI+H+S IG+A+ +NKG+MAR LA K S+  R+D  AE
Sbjct:  240 AADRSMGTEISEEDLENIQALAEQVVGFTEYRQQLAGYLTARMNAIAPNLTALVGELVGARLIAHAGSLTNLSKSPASTLQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGIRVDALAE 380          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_ASPFU (Nucleolar protein 58 OS=Aspergillus fumigatus GN=nop58 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.542e-44
Identity = 90/166 (54.22%), Postives = 122/166 (73.49%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFA-------EKNTTIFGEKLREQVEERL 488
            A   SMG ++S  DL N+Q  A++V+  +EYR++L  YL  +MN IAPNL +L+GE+VGARLI+HAGSLTNL+K P+ST+QILGAEKALFRALKT+ +TPKYGLI+H+S IG+A+ +NKG+MAR LA K S+  R+D  A       E++    G + R  +E +L
Sbjct:  240 AADRSMGTEISQEDLENIQALAEQVVGFAEYRQQLAGYLTARMNAIAPNLTALVGELVGARLIAHAGSLTNLSKSPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDALAEWDDDATEEDKAALGTEARYNLERKL 405          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_SCHPO (Nucleolar protein 58 OS=Schizosaccharomyces pombe GN=nop58 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 4.626e-44
Identity = 89/161 (55.28%), Postives = 126/161 (78.26%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTT--IFGEKLREQVEERL 488
            A + SMG +++  DL N+ M A +V++L+ YR +L EYL  +M  IAPNL +L+GE+VGARLI+HAGSL NLAK P+ST+QILGAEKALFRALKT+ +TPKYGLI+H+S +G+A+++NKG++AR LA K +++ R+D  ++K+TT    G + R +VE RL
Sbjct:  238 AAEISMGTEITEEDLDNIVMLADQVLELASYRAQLSEYLRNRMQAIAPNLTALVGELVGARLIAHAGSLMNLAKQPASTIQILGAEKALFRALKTKHSTPKYGLIYHASLVGQANSKNKGKIARVLATKAALSLRVDALSDKDTTNGNIGLENRIRVENRL 398          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_DEBHA (Nucleolar protein 58 OS=Debaryomyces hansenii GN=NOP58 PE=3 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 4.626e-44
Identity = 86/164 (52.44%), Postives = 127/164 (77.44%), Query Frame = 3
Query:    3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAE--KNTTIFGEKLREQVEERL 488
            +  A + SMG +++ +DL N++  A++++D + YR++L  YL ++M  IAPNL +L+GE+VGARLI+H+GSLT+LAK P+ST+QILGAEKALFRALKT+ +TPKYGL++H+S +G+AS +NKG++AR LA K ++A R D  AE   ++  FG  +R +VE RL
Sbjct:  235 VKSAAEVSMGTEITDIDLENIKALAEQIVDFAAYREQLSNYLSSRMKAIAPNLTALVGELVGARLIAHSGSLTSLAKAPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQASGKNKGKIARVLAAKAAVALRYDSLAEDRDDSGDFGLSVRTKVESRL 398          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_CANAL (Nucleolar protein 58 OS=Candida albicans GN=NOP58 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.041e-44
Identity = 87/161 (54.04%), Postives = 126/161 (78.26%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEK--NTTIFGEKLREQVEERL 488
            A + SMG +++  DL N++  A++++D + YR++L  YL ++M  IAPNL +++GE+VGARLI+HAGSLT+LAK P+ST+QILGAEKALFRALKT+ +TPKYG+I+H+S +G+AS +NKGR+AR LA K +++ R DCF E+   +  FG + R +VE RL
Sbjct:  238 AAEVSMGTEITEDDLNNIKALAEQIVDFAAYREQLSNYLSSRMKAIAPNLTAMVGELVGARLIAHAGSLTSLAKAPASTVQILGAEKALFRALKTKHDTPKYGIIYHASLVGQASGKNKGRIARTLAAKAAVSLRYDCFDEERDESDDFGLENRAKVEGRL 398          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_EMENI (Nucleolar protein 58 OS=Emericella nidulans GN=nop58 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44
Identity = 90/166 (54.22%), Postives = 121/166 (72.89%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFA-------EKNTTIFGEKLREQVEERL 488
            A   SMG ++S  DL N+Q  A++V+  SEYR +L  Y+  +MN IAPNL +L+G++VGARLI+HAGSLTNL+K P+STLQILGAEKALFRALKT+ +TPKYGLI+H+S IG+A+ +NKG+MAR LA K S+  R+D  A       E++    G + R  +E +L
Sbjct:  240 AADRSMGTEISEDDLENIQALAEQVVGFSEYRSQLAGYITARMNAIAPNLTALVGDLVGARLIAHAGSLTNLSKSPASTLQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGLRVDALAEWDDDVTEEDKAALGTEARFNLERKL 405          
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_ASPCL (Nucleolar protein 58 OS=Aspergillus clavatus GN=nop58 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.030e-43
Identity = 89/166 (53.61%), Postives = 122/166 (73.49%), Query Frame = 3
Query:   12 AGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFA-------EKNTTIFGEKLREQVEERL 488
            A   SMG ++S  DL N+Q  A++V+  +EYR++L  YL  +MN IAPNL +L+G++VGARLI+HAGSLTNL+K P+ST+QILGAEKALFRALKT+ +TPKYGLI+H+S IG+A+ +NKG+MAR LA K S+  R+D  A       E++    G + R  +E +L
Sbjct:  240 AADRSMGTEISQDDLENIQALAEQVVGFAEYRQQLAGYLTARMNAIAPNLTALVGDLVGARLIAHAGSLTNLSKSPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQATGKNKGKMARVLAAKASLGIRVDALADWEDDATEEDKAALGTEARYNLERKL 405          
The following BLAST results are available for this feature:
BLAST of CF504816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
NOP58_ASPTN7.136e-4555.42Nucleolar protein 58 OS=Aspergillus terreus (strai... [more]
NOP58_YARLI1.217e-4456.52Nucleolar protein 58 OS=Yarrowia lipolytica GN=NOP... [more]
NOP58_NEOFI3.542e-4454.22Nucleolar protein 58 OS=Neosartorya fischeri (stra... [more]
NOP58_ASPOR3.542e-4461.70Nucleolar protein 58 OS=Aspergillus oryzae GN=nop5... [more]
NOP58_ASPFU3.542e-4454.22Nucleolar protein 58 OS=Aspergillus fumigatus GN=n... [more]
NOP58_SCHPO4.626e-4455.28Nucleolar protein 58 OS=Schizosaccharomyces pombe ... [more]
NOP58_DEBHA4.626e-4452.44Nucleolar protein 58 OS=Debaryomyces hansenii GN=N... [more]
NOP58_CANAL6.041e-4454.04Nucleolar protein 58 OS=Candida albicans GN=NOP58 ... [more]
NOP58_EMENI7.890e-4454.22Nucleolar protein 58 OS=Emericella nidulans GN=nop... [more]
NOP58_ASPCL1.030e-4353.61Nucleolar protein 58 OS=Aspergillus clavatus GN=no... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-307 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504816 ID=CF504816; Name=CF504816; organism=Citrus sinensis; type=EST; length=492bp
AGATTGTGGAGGCTGGCAAAGCATCAATGGGACAGGATTTGTCTGCAGTT
GACTTAGTTAATGTCCAGATGTTTGCTCAAAGGGTGATGGACCTCTCTGA
GTACAGGAAGAAACTTTATGAGTATCTGGTTACTAAAATGAATGATATTG
CACCCAATTTGGCCTCCTTGATTGGTGAAGTTGTTGGGGCTCGGTTGATT
TCTCATGCTGGTAGTCTCACAAATCTGGCTAAGTGTCCATCTTCTACCCT
TCAGATCCTTGGTGCTGAGAAAGCACTCTTCAGAGCATTAAAAACTCGAG
GAAACACACCAAAGTATGGTCTGATTTTCCACTCATCTTTCATTGGTCGA
GCTTCTGCCCGGAACAAGGGCCGTATGGCTCGATACCTTGCAAACAAGTG
TTCTATTGCATCTCGCATTGACTGTTTTGCAGAAAAAAACACTACCATTT
TTGGGGAGAAACTTCGTGAACAAGTTGAAGAGCGGCTGGACT
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