CF504958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.873e-22 Identity = 46/77 (59.74%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 143 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 GT G + I+SR F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ +KRE+AAF AQT HETTGGW Sbjct: 19 GTARGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGW 95
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.873e-22 Identity = 48/87 (55.17%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 116 CAGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 C G T GG + I+SR +F+ +L +RNDA CPA+ FYTYDAF+ AA AFP F +G+ RKRE+AAF AQT HETTGGW Sbjct: 63 CGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGW 149
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.194e-22 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 2 Query: 137 GHGTDGGELGKIISREMFEDLLPYRNDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G G GG++G +IS MF+ +L +RND C + FY+Y+AFI AA++F GFG +G+ T RKREIAAFFAQT HETTGGW Sbjct: 70 GPGPSGGDIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGW 149
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.172e-22 Identity = 44/69 (63.77%), Postives = 56/69 (81.16%), Query Frame = 2 Query: 167 KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 KIISR MF+ +L +RN+ CPA+GFYTYDAF+ AA++FP FG +G+ +RKRE+AAF QT HETTGGW Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGW 72
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22 Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 143 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 GT G + IIS F+ +L +RND C A+GFYTYDAF+ AA AFPGFG +G+ RKR++AAF AQT HETTGGW Sbjct: 19 GTAHGSVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGW 95
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22 Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 116 CAGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGG 370 C+G +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FP F +G++ RKREIAAF AQT HETTGG Sbjct: 40 CSG---SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGG 121
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22 Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 2 Query: 116 CAGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGG 370 C+G +G G L +ISRE F +L +RND CPARGFYTYDAFI AA++FP F +G++ RKREIAAF AQT HETTGG Sbjct: 62 CSG---SGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGG 143
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.293e-22 Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 2 Query: 143 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F GFG +G+ T RKRE+AAFFAQT HETTGGW Sbjct: 79 GPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGW 155
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 9.293e-22 Identity = 48/78 (61.54%), Postives = 59/78 (75.64%), Query Frame = 2 Query: 143 GTDGGELGKIISREMFEDLLPYRNDARCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FPGFG +G+ T RKREIAAFFAQT HETTGGW Sbjct: 60 GGSPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGW 137
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 102.064 bits (253), Expect = 9.293e-22 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 2 Query: 152 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 GG + I+SR +F+ +L +RND C A+GFYTYDAF+ AA AF GFG +G RKRE+AAF AQT HETTGGW Sbjct: 74 GGGVSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGW 147 The following BLAST results are available for this feature:
BLAST of CF504958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504958 ID=CF504958; Name=CF504958; organism=Citrus sinensis; type=EST; length=373bpback to top |