CF504958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.233e-18 Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 152 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGG 370 GG G +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+GG Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGG 166
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.233e-18 Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 2 Query: 152 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGG 370 GG G +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF AQT H T+GG Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATSGG 166
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.141e-18 Identity = 46/98 (46.94%), Postives = 59/98 (60.20%), Query Frame = 2 Query: 98 IVEAALCAGERDTGHGTDGG------ELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 +V AA A R G G GG + I+S +++ L +++DA CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW Sbjct: 22 VVVAASGAEARWYGGGGGGGYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGW 119
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.535e-16 Identity = 36/64 (56.25%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 176 SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG 367 + MFE +LP RN+ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFFAQT ET+G Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSG 131
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.896e-15 Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 2 Query: 161 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 + +IS +FE +L +R GFYTYDAFI AA++FP F +G+ +RKRE+AAF AQT HETTGGW Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGW 63
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 65.855 bits (159), Expect = 7.380e-11 Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 2 Query: 134 TGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG 367 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FP FG G+ RKRE+AAF A T+G Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSG 196 The following BLAST results are available for this feature:
BLAST of CF504958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504958 ID=CF504958; Name=CF504958; organism=Citrus sinensis; type=EST; length=373bpback to top |