CF504989

Overview
NameCF504989
Unique NameCF504989
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.497e-48
Identity = 88/131 (67.18%), Postives = 111/131 (84.73%), Query Frame = 1
Query:   58 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            A++ +G A + AIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGA
Sbjct:   16 AKKLEGDAKIWAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVAEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGA 146          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 5.562e-48
Identity = 88/133 (66.17%), Postives = 111/133 (83.46%), Query Frame = 1
Query:   52 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            R  +R +G A +LAIGTA PA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGA
Sbjct:   11 RREKRIEGHAKILAIGTAIPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGA 143          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.114e-47
Identity = 89/134 (66.42%), Postives = 115/134 (85.82%), Query Frame = 1
Query:   52 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            R  QRADG A++LAIGTA P ++V+Q+ YPD+YFRIT +EH TELK+KFKR+C++S IK+RYMYLTEEILK+NP++CA++  PSLDARQ ++ +EVP+L KEAA KAI+EWGQ KS ITHLIFC+T+  D+PGA
Sbjct:   10 RKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGA 143          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.114e-47
Identity = 93/144 (64.58%), Postives = 115/144 (79.86%), Query Frame = 1
Query:   25 LAMATVQEIRNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            + M T    R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIK WG+P S+ITHL+FCTTSGVDMPGA
Sbjct:    5 VTMLTDTWSRRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSNIRKRHMVLTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKVWGRPISEITHLVFCTTSGVDMPGA 148          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 6.150e-47
Identity = 89/135 (65.93%), Postives = 113/135 (83.70%), Query Frame = 1
Query:   52 RNAQR--ADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            R A+R   +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+L++NP++C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGA
Sbjct:   14 RRAKRFEIEGYAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLQKNPSLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGA 148          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.789e-46
Identity = 88/131 (67.18%), Postives = 110/131 (83.97%), Query Frame = 1
Query:   58 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            A+R +G A +LAIGTATP + V+QA YPD+YFRIT SE + E KEKF+R+C+KS I+ R++ LTEE+LK++PN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGA
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSERLLEHKEKFRRICNKSKIRFRHLVLTEELLKKSPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGA 144          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.418e-43
Identity = 87/124 (70.16%), Postives = 98/124 (79.03%), Query Frame = 1
Query:   79 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            A+VLAIGT  P H + Q DYPD+YFR T SEHMTELKEKFKR+C KS I+KR+ YLTEEILKEN  +  Y A SLDARQ I+  EVPKLG+EAA KAI EWGQP SKITH++F TTSG  MPGA
Sbjct:   20 ASVLAIGTTNPEHFILQEDYPDFYFRNTNSEHMTELKEKFKRICVKSHIRKRHFYLTEEILKENQGIATYGAGSLDARQRILETEVPKLGQEAALKAIAEWGQPISKITHVVFATTSGFMMPGA 143          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: BBS_PHASS (Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.158e-43
Identity = 77/140 (55.00%), Postives = 109/140 (77.86%), Query Frame = 1
Query:   31 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            M +++ I+ A RADG A++LAIG A P + + Q+ YPD+YFR+T SEH+ +LK+KF+R+C+K+ I+KR+    EE L  NP    +M  SL+ RQ++ + E+PKLG +AATKAI++WGQPKS+ITHLIFCTTSG+D+PGA
Sbjct:    1 MLSLESIKKAPRADGFASILAIGRANPDNIIEQSAYPDFYFRVTNSEHLVDLKKKFQRICEKTAIRKRHFVWNEEFLTANPCFSTFMDKSLNVRQEVAISEIPKLGAKAATKAIEDWGQPKSRITHLIFCTTSGMDLPGA 140          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 7.779e-42
Identity = 81/133 (60.90%), Postives = 103/133 (77.44%), Query Frame = 1
Query:   52 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            R  +RA GP +VLAIG+A P +  +Q+ +PD+YF IT+S HM E+K KF RMC KS IKKR M++ E+IL+ +P++ +Y   SLD RQD++V EVPKLGK AA  AI EWGQPKS ITHLIFCT+SG+DMPGA
Sbjct:   15 RKKERASGPVSVLAIGSANPPNVFHQSLFPDFYFNITQSNHMAEVKAKFTRMCAKSGIKKRRMHINEDILEAHPSIRSYHDNSLDVRQDMLVEEVPKLGKVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGA 147          
BLAST of CF504989 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.242e-39
Identity = 84/141 (59.57%), Postives = 99/141 (70.21%), Query Frame = 1
Query:   31 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYY-FRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGA 450
            M  V+ IR  QRA+GPAT++AIGT+TP ++V+Q++YPDYY F    +      +  FKRMC+KSMIKKRYMYLTE   K            L ARQD+VVVEVPKLGKE   KAIK  GQPKSKI  L+FCTTSGVDMPGA
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYMYLTETYWKRIQMFVPTWLLPLKARQDMVVVEVPKLGKEVQPKAIKGMGQPKSKINPLVFCTTSGVDMPGA 141          
The following BLAST results are available for this feature:
BLAST of CF504989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CHSB_IPONI2.497e-4867.18Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPONI5.562e-4866.17Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
DPSS_PINSY2.114e-4766.42Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]
CHSB_IPOTF2.114e-4764.58Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSB_IPOTR6.150e-4765.93Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPOTR1.789e-4667.18Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
TBSYN_HYPAN1.418e-4370.16Trihydroxybenzophenone synthase OS=Hypericum andro... [more]
BBS_PHASS3.158e-4355.00Bibenzyl synthase OS=Phalaenopsis sp. GN=BIBSY212 ... [more]
VPS_PSINU7.779e-4260.90Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
CHSY_PERAE1.242e-3959.57Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-482 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504989 ID=CF504989; Name=CF504989; organism=Citrus sinensis; type=EST; length=450bp
AAAACATATTCATTACGGGTTTAACTTGCAATGGCAACCGTTCAAGAGAT
CAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGTA
CGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTATTAC
TTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCAA
GCGCATGTGTGACAAGTCAATGATTAAGAAGCGTTACATGTACTTAACGG
AAGAGATTTTGAAGGAAAATCCCAACATGTGCGCTTACATGGCTCCATCA
CTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGAA
AGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAGA
TCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGCC
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