CF505034

Overview
NameCF505034
Unique NameCF505034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 7.133e-59
Identity = 110/119 (92.44%), Postives = 117/119 (98.32%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMI+E DAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMISEADADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 9.317e-59
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149

HSP 2 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 9.317e-59
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149

HSP 2 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 9.317e-59
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149

HSP 2 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 9.317e-59
Identity = 112/119 (94.12%), Postives = 117/119 (98.32%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149

HSP 2 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 1.217e-58
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MMAK
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 1.589e-58
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 1.589e-58
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.076e-58
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
[Close]
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 224.172 bits (570), Expect = 2.076e-58
Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 1 
Query:    1 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   31 KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 
Query:  139 MKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 357
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76
The following BLAST results are available for this feature:
BLAST of CF505034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
CALM1_SOLTU7.133e-5992.44Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]
CALM_PROMN9.317e-5994.12Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PFIPI9.317e-5994.12Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_KARMI9.317e-5994.12Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU9.317e-5994.12Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM_MACPY1.217e-5892.44Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_METSE1.589e-5891.60Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU1.589e-5891.60Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_PYTSP2.076e-5891.60Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN2.076e-5891.60Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-527 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505034 ID=CF505034; Name=CF505034; organism=Citrus sinensis; type=EST; length=456bp
AAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGC
TGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGCAATGGAACTA
TTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACC
GACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCA
GAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAG
GAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGAT
GTTGATGGTGATGGCCAAATAAATTATGAGGAATTTGTCAAGGTTATGAT
GGCCAAGTAATGACCCCACCCACCAATACTTATAAAATGGGTTGACTAAA
TTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTC
ATGAGG
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