CF505034

Overview
NameCF505034
Unique NameCF505034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length456
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 37/103 (35.92%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   46 EAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHV--MTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 348
            E E+ +++ EVD D NG I++ EF+++   K +   SEE L++AF +FD D++G I+  EL ++  +T++ E++     +E++ EAD + D  I+++EFV +M
Sbjct:  418 EEEVDNILKEVDFDKNGYIEYSEFISVCMDK-QILFSEERLRDAFNLFDTDKSGKITKEELANLFGLTSISEQMW----NEVLGEADKNKDNMIDFDEFVNMM 515          
BLAST of CF505034 vs. ExPASy Swiss-Prot
Match: CAVP_BRAFL (Calcium vector protein OS=Branchiostoma floridae PE=2 SV=3)

HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 39/113 (34.51%), Postives = 64/113 (56.64%), Query Frame = 1
Query:   16 VMRSLGQNPTEAELQDMINEVDADGNGTIDF-PEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-LTDEEVDEMIREADVDGDGQINYEEFVKVM 348
            ++  LGQ  T+ E + ++ E         +  PE   ++  K    D EEE+  AF+VFD + +G I   E + +M  +GE+ LTD EV+E ++EAD DG+G I+  EF+ ++
Sbjct:   40 MLTKLGQTYTKRETEAIMKEARGPKGDKKNLGPEEWLVLCSKWVRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 152          
The following BLAST results are available for this feature:
BLAST of CF505034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
CDPK1_PLAF79.447e-1135.92Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CAVP_BRAFL9.447e-1134.51Calcium vector protein OS=Branchiostoma floridae P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-527 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505034 ID=CF505034; Name=CF505034; organism=Citrus sinensis; type=EST; length=456bp
AAGGAGCTTGGCACTGTTATGAGGTCACTGGGTCAGAACCCCACTGAGGC
TGAGCTCCAGGACATGATCAATGAAGTGGATGCTGATGGCAATGGAACTA
TTGATTTTCCTGAATTCCTAAACCTCATGGCCAGGAAGATGAAGGATACC
GACTCTGAGGAGGAGCTGAAAGAGGCCTTCCGGGTTTTCGACAAGGATCA
GAATGGTTTCATCTCAGCTGCTGAGCTGCGCCATGTGATGACAAACCTAG
GAGAGAAACTTACTGATGAAGAAGTTGATGAGATGATAAGGGAAGCTGAT
GTTGATGGTGATGGCCAAATAAATTATGAGGAATTTGTCAAGGTTATGAT
GGCCAAGTAATGACCCCACCCACCAATACTTATAAAATGGGTTGACTAAA
TTATAAAGGGATTCCTAGTTTTCTCTTTTACAATTTTTAATTTGATAGTC
ATGAGG
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