CF505036

Overview
NameCF505036
Unique NameCF505036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length261
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.957e-25
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+S ESN  DLLRINT+RG+M  DG+SRFSI  K IY+F+GTSTF EYTV+HV
Sbjct:  104 HCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHV 157

HSP 2 Score: 53.1434 bits (126), Expect = 1.957e-25
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ L PGDHVLPV T EC+EC
Sbjct:   74 IVESVGEGVTDLAPGDHVLPVFTGECKEC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.957e-25
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+S ESN  DLLRINT+RG+M  DG+SRFSI  K IY+F+GTSTF EYTV+HV
Sbjct:  104 HCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHV 157

HSP 2 Score: 53.1434 bits (126), Expect = 1.957e-25
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ L PGDHVLPV T EC+EC
Sbjct:   74 IVESVGEGVTDLAPGDHVLPVFTGECKEC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.958e-25
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC SEESN  DLLRIN +RG+M +DGQSRF+I  K I++FLGTSTF EYTV+HV
Sbjct:  104 HCMSEESNLCDLLRINVDRGVMIDDGQSRFTIDGKPIFHFLGTSTFSEYTVIHV 157

HSP 2 Score: 52.373 bits (124), Expect = 1.958e-25
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ L PGDHVLPV T EC+EC
Sbjct:   74 IVESVGEGVTELVPGDHVLPVFTGECKEC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.315e-25
Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVH 257
            HC+SEESN  DLLRINT+RG+M ND +SRFSIK + +++F+GTSTF EYTVVH
Sbjct:  105 HCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVH 157

HSP 2 Score: 51.9878 bits (123), Expect = 4.315e-25
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ LKPGDH LPV T EC EC
Sbjct:   75 IVESVGEGVTHLKPGDHALPVFTGECGEC 103
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.641e-25
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+S ESN  DLLRINT+RG+M  DG+SRFSI  K IY+F+GTSTF EYTV+HV
Sbjct:   31 HCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHV 84

HSP 2 Score: 51.6026 bits (122), Expect = 5.641e-25
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            I+ESVGEGV+ + PGDHVLPV T EC+EC
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKEC 29
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.309e-25
Identity = 37/54 (68.52%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+SEESN  DLLRIN +RG+M  DGQSRF+I  K I++F+GTSTF EYTV+HV
Sbjct:  104 HCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHV 157

HSP 2 Score: 51.2174 bits (121), Expect = 7.309e-25
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ L PGDHVLPV T EC++C
Sbjct:   74 IVESVGEGVTELVPGDHVLPVFTGECKDC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.309e-25
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+S ESN  DLLRINT+RG+M  DG+SRFSI  K IY+F+GTSTF EYTV+HV
Sbjct:  104 HCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHV 157

HSP 2 Score: 51.9878 bits (123), Expect = 7.309e-25
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ + PGDHVLPV T EC+EC
Sbjct:   74 IVESVGEGVTDVAPGDHVLPVFTGECKEC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.513e-25
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+S ESN  DLLRINT+RG+M  DG+SRFSI  K IY+F+GTSTF EYTV+HV
Sbjct:  104 HCKSAESNMCDLLRINTDRGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHV 157

HSP 2 Score: 51.6026 bits (122), Expect = 9.513e-25
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            I+ESVGEGV+ + PGDHVLPV T EC+EC
Sbjct:   74 IIESVGEGVTDVAPGDHVLPVFTGECKEC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.611e-24
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVHV 260
            HC+S ESN  DLLRINT RG+M  DG+SRFSI  K IY+F+GTSTF EYTV+HV
Sbjct:  104 HCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHV 157

HSP 2 Score: 51.6026 bits (122), Expect = 1.611e-24
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            I+ESVGEGV+ + PGDHVLPV T EC+EC
Sbjct:   74 IIESVGEGVTDVAPGDHVLPVFTGECKEC 102
[Close]
BLAST of CF505036 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.611e-24
Identity = 36/53 (67.92%), Postives = 46/53 (86.79%), Query Frame = 3 
Query:   99 HCQSEESNTGDLLRINTERGIMTNDGQSRFSIKEKLIYNFLGTSTFGEYTVVH 257
            HC+SEESN  +LLRINT+RG+M ND +SRFSIK + +++F+GTSTF EYTVVH
Sbjct:  105 HCKSEESNMCNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVH 157

HSP 2 Score: 51.9878 bits (123), Expect = 1.611e-24
Identity = 23/29 (79.31%), Postives = 24/29 (82.76%), Query Frame = 1 
Query:    1 IVESVGEGVSGLKPGDHVLPVLTAECREC 87
            IVESVGEGV+ LKPGDH LPV T EC EC
Sbjct:   75 IVESVGEGVTHLKPGDHALPVFTGECGEC 103
The following BLAST results are available for this feature:
BLAST of CF505036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
ADH1_ORYSJ1.957e-2570.37Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.957e-2570.37Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH2_HORVU1.958e-2570.37Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADH1_PEA4.315e-2569.81Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_ZEALU5.641e-2570.37Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH3_HORVU7.309e-2568.52Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_HORVU7.309e-2570.37Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH1_MAIZE9.513e-2570.37Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH1_PENAM1.611e-2470.37Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_TRIRP1.611e-2467.92Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-529 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505036 ID=CF505036; Name=CF505036; organism=Citrus sinensis; type=EST; length=261bp
ATTGTGGAGAGCGTTGGGGAAGGGGTATCTGGTCTCAAACCAGGAGACCA
TGTCCTTCCTGTGTTAACAGCAGAGTGCAGGGAGTGTTGCCAACTCGCCA
TTGTCAATCAGAAGAAAGCAACACGGGCGATCTTCTTAGAATCAATACCG
AGAGGGGAATTATGACCAATGATGGTCAGTCGAGGTTCTCAATCAAGGAG
AAGCTGATATACAATTTTCTTGGCACATCCACATTCGGTGAATACACAGT
CGTCCATGTTG
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