CF509533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_STAEQ (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.757e-18 Identity = 53/132 (40.15%), Postives = 77/132 (58.33%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 399 AF K V GDG ++QG +E +N A+ + PAI V +NN+Y + T ++ AA++ + +PG++VDGMDALAV QA A+E A+ GP ++E TYRY H+M+ D + YRT DE Sbjct: 157 AFGLKKRGKNAVAITYTGDGGSSQGDFYEGINFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDE 288
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.154e-17 Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTA--EWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A A + K + F +G+G++NQG E N AA+ LP I +CENN Y + + A ++ S G +PG+ V+G D L V QA K A+E A + GP ++E +YR HS D S+YR R+E+ Sbjct: 136 ALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVPYDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLTPHSSDDDDSSYRGREEV 267
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_THET2 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=TT_C1757 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.254e-17 Identity = 47/132 (35.61%), Postives = 68/132 (51.52%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A + K + V +GDGA ++G + +N AA+ PA+ VCENN Y + SP+ + +PG VDGMD LA K A E A + GP ++E+ YRY HS +D S YR ++E+ Sbjct: 157 AISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEV 288
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_BACCE (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus cereus GN=pdhA PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 1.578e-16 Identity = 50/131 (38.17%), Postives = 73/131 (55.73%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRD 396 A K ++V GDG A+QG +E +N A + PAI V +NN Y + T + AAK+ + + G++VDGMD LAV A FA+E A+ GP ++E T+RY H+M+ D + YRT+D Sbjct: 158 ALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFKAPAIFVVQNNRYAISTPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKD 288
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ACOA_RALEH (Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=acoA PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16 Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR--GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A A K+ V GDGA+NQG E+LN+AA+W+LP I V ENN Y T+ SY R G +PG+ VDG D AV +A A + GP +LE R++GH D TYR E+ Sbjct: 138 ALAAKFRGKGEVGITFCGDGASNQGTFLESLNLAAVWNLPVIFVIENNGYAESTSRDYGTAVDSYVDRAAGFGIPGVTVDGTDFFAVHEAAGEVIRRAREGGGPSLLECKMVRFYGHFEGD-AQTYRAAGEL 268
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_THET8 (2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=TTHA0229 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A + K + V +GDGA ++G + +N AA+ PA+ + ENN Y + SP+ + +PG VDGMD LA K A E A + GP ++E+ YRY HS +D S YR ++E+ Sbjct: 157 AISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEV 288
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_ACHLA (Pyruvate dehydrogenase E1 component subunit alpha (Fragment) OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.745e-15 Identity = 50/132 (37.88%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDY--VPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRDE 399 A A K K VT GDG G+ +E LN AA + P + V +NN + + T +A+ S + ++G +P ++VDG D LA+ A K A + A K +GP ++E TYR H+ S DP S YRT++E Sbjct: 129 AMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVAVIQNNQWAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDGPTLIEAFTYRMGPHTTSDDPCSIYRTKEE 260
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.977e-15 Identity = 48/133 (36.09%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRGDYVPGLK---VDGMDALAVKQACKFAKEHALKNG-PMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 ++AQK + ++ T +G+GAA++G A+N AA P I C NN + + T K RG G+K VDG D AV K A++ A++ P+++E TYR HS SD S YRT +EI Sbjct: 208 SYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAALSTPTIFFCRNNKWAISTPSKEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVGHHSTSDDSSRYRTVEEI 340
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.632e-15 Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A+A K + V +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE+ Sbjct: 220 AYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEV 351
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.632e-15 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A+A K + + +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE+ Sbjct: 217 AYAAKRANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEV 348 The following BLAST results are available for this feature:
BLAST of CF509533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509533 ID=CF509533; Name=CF509533; organism=Citrus sinensis; type=EST; length=402bpback to top |