CF509533
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.632e-15 Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A+A K + V +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE+ Sbjct: 220 AYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEV 351
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.632e-15 Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A+A K + V +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE+ Sbjct: 220 AYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEV 351
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.661e-15 Identity = 47/137 (34.31%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A+A K + + +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE+ Sbjct: 216 AYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEV 347
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.661e-15 Identity = 48/137 (35.04%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-------AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDEI 402 A+A K + V +G+GAA++G N AA + P I C NN Y + T + AA+ P Y + ++VDG D AV A K A+ A+ +N P ++E TYR HS SD S YR+ DE+ Sbjct: 230 AYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGY-----GILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEV 361
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_BACST (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus stearothermophilus GN=pdhA PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.930e-14 Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRD 396 A K + V GDG +QG +E +N A + PAI V +NN + + T + AK+ + +PG++VDGMD LAV A K A+E A+ GP ++E +RY H+MS D + YR+++ Sbjct: 156 ALGLKMRGKKAVAITYTGDGGTSQGDFYEGINFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAAVKAARERAINGEGPTLIETLCFRYGPHTMSGDDPTRYRSKE 286
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_BACSU (Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus subtilis GN=pdhA PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 3.291e-14 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 16 AFAQKYSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT--AEWRAAKSPSYYKRGDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMS-DPGSTYRTRD 396 A K + V GDG A+QG +E +N A + PAI V +NN Y + T + AA++ + + G++VDGMD LAV A A+E A+ GP ++E T+RY H+M+ D + YRT++ Sbjct: 158 ALGLKKRGKKAVAITYTGDGGASQGDFYEGINFAGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAEARERAINGEGPTLIETLTFRYGPHTMAGDDPTKYRTKE 288
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_MYCGE (Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma genitalium GN=pdhA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.529e-11 Identity = 41/126 (32.54%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 31 YSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-AEWRAAKSPSYYKR-GDYVPGLKVDGMDALAVKQACKFAKEHAL-KNGPMILEMDTYRYHGHSMSDPGSTYRTRDE 399 Y K V + GDG +G+ +EA+NIA++ + NN + + T + +A S K +P ++VDG D +A +A + A +A NGP+++E +YR H+ SD S YRT+ E Sbjct: 151 YKKQPNVAVTMIGDGGTAEGEFYEAMNIASIHKWNTVFCINNNQFAISTRTKLESAVSDLSVKAIACGIPRVRVDGNDLIASYEAMQDAANYARGGNGPVLIEFFSYRQGPHTTSDDPSIYRTKQE 276
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODPA_MYCPN (Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma pneumoniae GN=pdhA PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.810e-11 Identity = 40/126 (31.75%), Postives = 67/126 (53.17%), Query Frame = 1 Query: 31 YSKDETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGT-AEWRAAKSPSYYKR-GDYVPGLKVDGMDALAVKQACKFAKEHALK-NGPMILEMDTYRYHGHSMSDPGSTYRTRDE 399 Y K V + GDG +G+ +EA+NIA++ ++ NN + + T + +A S K +P ++VDG D +A +A A +A NGP+++E ++R H+ SD S YRT++E Sbjct: 151 YKKLPNVAVTMIGDGGTAEGEFYEAMNIASIHKWNSVFCINNNQFAISTRTKLESAVSDLSTKAIAVNIPRIRVDGNDLIASYEAMHEAANYARSGNGPVLIEFFSWRQGPHTTSDDPSIYRTKEE 276
BLAST of CF509533 vs. ExPASy Swiss-Prot
Match: ODBA_PSEAE (2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas aeruginosa GN=bkdA1 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.588e-11 Identity = 44/124 (35.48%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 40 DETVTFALYGDGAANQGQLFEALNIAALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKR---GDYVPGLKVDGMDALAVKQACKFAKEHALKN-GPMILEMDTYRYHGHSMSDPGSTYRTRDE 399 D + A GDGA + AL A ++ P IL NN + + T + A + + G + L+VDG D LAV A ++A E A +N GP ++E TYR HS SD S YR D+ Sbjct: 203 DTRIASAWIGDGATAESDFHTALTFAHVYRAPVILNVVNNQWAISTFQAIAGGEGTTFANRGVGCGIASLRVDGNDFLAVYAASEWAAERARRNLGPSLIEWVTYRAGPHSTSDDPSKYRPADD 326 The following BLAST results are available for this feature:
BLAST of CF509533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509533 ID=CF509533; Name=CF509533; organism=Citrus sinensis; type=EST; length=402bpback to top |