CF509550

Overview
NameCF509550
Unique NameCF509550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length357
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_DUNAC (Plasma membrane ATPase OS=Dunaliella acidophila GN=DHA1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.322e-23
Identity = 61/122 (50.00%), Postives = 70/122 (57.38%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALL---GQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKM+TGD L IGKET + LGMGT MYPS  L+     D +          ++E  +GFA VFPEHK+EIV+ LQ   H  GMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  532 VKMVTGDHLLIGKETAKMLGMGTEMYPSEVLIKARNGDVEAPHGYKNYVAMVEACNGFAQVFPEHKFEIVEILQEAHHRVGMTGDGVNDAPALKKAHVGVAVADATDAARGAADIVLTEPGL 653          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: Y1226_METJA (Putative cation-transporting ATPase MJ1226 OS=Methanocaldococcus jannaschii GN=MJ1226 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.492e-22
Identity = 56/119 (47.06%), Postives = 68/119 (57.14%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            +KM+TGD +AI K   R LG+G  +   S LL + K   I     DE++E+ADGFA VFPEHKY+IV  LQ R H+  MTGDGVNDAPALKK                    VL  PG+
Sbjct:  477 IKMVTGDHVAIAKNIARMLGIGDKIISISELLKKLKRGEIKEEKFDEIVEEADGFAEVFPEHKYKIVDSLQKRGHLVAMTGDGVNDAPALKKADCGIAVSNATDAARAAADIVLLSPGI 595          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA2_SCHPO (Plasma membrane ATPase 2 OS=Schizosaccharomyces pombe GN=pma2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.139e-21
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            +KM+TGD + I KET R+LGMGTN+Y ++  LG      +    +++ +E ADGFA VFP+HKY +V  LQ R ++  MTGDGVNDAP+LKK
Sbjct:  640 IKMLTGDAVGIAKETARQLGMGTNVY-NAERLGLSGGGDMPGSEVNDFVEAADGFAEVFPQHKYAVVDILQQRGYLVAMTGDGVNDAPSLKK 730          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_KLULA (Plasma membrane ATPase OS=Kluyveromyces lactis GN=PMA1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.047e-20
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            VKM+TGD + I KET R+LG+GTN+Y ++  LG      +    + + +E ADGFA VFP+HKY +V+ LQ R ++  MTGDGVNDAP+LKK
Sbjct:  535 VKMLTGDAVGIAKETCRQLGLGTNIY-NAERLGLGGGGDMPGSELADFVENADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKK 625          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_YEAST (Plasma membrane ATPase 1 OS=Saccharomyces cerevisiae GN=PMA1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.979e-20
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            VKM+TGD + I KET R+LG+GTN+Y ++  LG      +    + + +E ADGFA VFP+HKY +V+ LQ R ++  MTGDGVNDAP+LKK
Sbjct:  554 VKMLTGDAVGIAKETCRQLGLGTNIY-NAERLGLGGGGDMPGSELADFVENADGFAEVFPQHKYRVVEILQNRGYLVAMTGDGVNDAPSLKK 644          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_AJECA (Plasma membrane ATPase OS=Ajellomyces capsulata GN=PMA1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.979e-20
Identity = 46/92 (50.00%), Postives = 66/92 (71.74%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            +KM+TGD + I +ET R+LG+GTN+Y ++  LG     ++    + + +E ADGFA VFP+HKY +V+ LQ R ++  MTGDGVNDAP+LKK
Sbjct:  550 IKMLTGDAVGIARETSRQLGLGTNVY-NAERLGLGGGGTMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKK 640          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA2_YEAST (Plasma membrane ATPase 2 OS=Saccharomyces cerevisiae GN=PMA2 PE=1 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 5.197e-20
Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            +KM+TGD + I KET R+LG+GTN+Y ++  LG      +    + + +E ADGFA VFP+HKY +V+ LQ R ++  MTGDGVNDAP+LKK
Sbjct:  583 IKMLTGDAVGIAKETCRQLGLGTNIY-NAERLGLGGGGDMPGSELADFVENADGFAEVFPQHKYRVVEILQNRGYLVAMTGDGVNDAPSLKK 673          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_NEUCR (Plasma membrane ATPase OS=Neurospora crassa GN=pma-1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.197e-20
Identity = 46/92 (50.00%), Postives = 65/92 (70.65%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            +KM+TGD + I +ET R+LG+GTN+Y ++  LG      +    + + +E ADGFA VFP+HKY +V+ LQ R ++  MTGDGVNDAP+LKK
Sbjct:  554 IKMLTGDAVGIARETSRQLGLGTNIY-NAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKK 644          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_SCHPO (Plasma membrane ATPase 1 OS=Schizosaccharomyces pombe GN=pma1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.788e-20
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            VKM+TGD + I KET R+LGMGTN+Y ++  LG     ++    + + +E ADGF  VFP+HKY +V  LQ R ++  MTGDGVNDAP+LKK
Sbjct:  552 VKMLTGDAVDIAKETARQLGMGTNIY-NAERLGLTGGGNMPGSEVYDFVEAADGFGEVFPQHKYAVVDILQQRGYLVAMTGDGVNDAPSLKK 642          
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_ZYGRO (Plasma membrane ATPase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.158e-19
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 1
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 276
            VKM+TGD + I KET R+LG+GTN+Y +  L G     S+    + + +E ADGFA VFP+HK+ +V  LQ R ++  MTGDGVNDAP+LKK
Sbjct:  556 VKMLTGDAVGIAKETCRQLGLGTNIYDAERL-GLGGGGSMPGSEMYDFVENADGFAEVFPQHKFAVVDILQQRGYLVAMTGDGVNDAPSLKK 646          
The following BLAST results are available for this feature:
BLAST of CF509550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PMA1_DUNAC1.322e-2350.00Plasma membrane ATPase OS=Dunaliella acidophila GN... [more]
Y1226_METJA2.492e-2247.06Putative cation-transporting ATPase MJ1226 OS=Meth... [more]
PMA2_SCHPO6.139e-2152.17Plasma membrane ATPase 2 OS=Schizosaccharomyces po... [more]
PMA1_KLULA3.047e-2052.17Plasma membrane ATPase OS=Kluyveromyces lactis GN=... [more]
PMA1_YEAST3.979e-2052.17Plasma membrane ATPase 1 OS=Saccharomyces cerevisi... [more]
PMA1_AJECA3.979e-2050.00Plasma membrane ATPase OS=Ajellomyces capsulata GN... [more]
PMA2_YEAST5.197e-2051.09Plasma membrane ATPase 2 OS=Saccharomyces cerevisi... [more]
PMA1_NEUCR5.197e-2050.00Plasma membrane ATPase OS=Neurospora crassa GN=pma... [more]
PMA1_SCHPO6.788e-2052.17Plasma membrane ATPase 1 OS=Schizosaccharomyces po... [more]
PMA1_ZYGRO1.158e-1952.17Plasma membrane ATPase OS=Zygosaccharomyces rouxii... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-058 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509550 ID=CF509550; Name=CF509550; organism=Citrus sinensis; type=EST; length=357bp
GTTAAAATGATTACTGGAGATCAACTGGCAATAGGAAAGGAGACTGGACG
TCGTTTGGGAATGGGAACCAACATGTATCCTTCATCTGCTTTGCTAGGAC
AGGACAAGGATGAGTCTATCGCTGCTTTACCTATTGATGAACTGATAGAA
AAAGCTGACGGCTTTGCTGGTGTCTTCCCTGAACACAAGTATGAGATAGT
AAAACGCTTACAAGCTAGGAAACATATATGTGGGATGACTGGTGATGGTG
TCAACGATGCTCCTGCTCTCAAGAAGGCTGACATTGGGATAGCCGTTGCG
GATGCAACTGATGCTGCTCGTAGTGCTTCTGACATAGTCCTTACAGAACC
TGGCCTT
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