CF509648

Overview
NameCF509648
Unique NameCF509648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.416e-19
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 2
Query:  254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400
            L CPRC+S  TKFCYYNNY+++QPR+FCK C+RYWT GGT+RNVPVG G
Sbjct:  138 LPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAG 186          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF33_ARATH (Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana GN=DOF3.3 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 8.416e-19
Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 2
Query:  254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400
            L CPRC S  TKFCYYNNY+++QPR+FCK+C+RYWT GGT+RNVPVG G
Sbjct:  110 LPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 158          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF55_ARATH (Dof zinc finger protein DOF5.5 OS=Arabidopsis thaliana GN=DOF5.5 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 34/49 (69.39%), Postives = 44/49 (89.80%), Query Frame = 2
Query:  254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400
            L CPRC+S  TKFCYYNNY+++QPR+FCK+C+RYWT GGT+R+VP+G G
Sbjct:   54 LPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAG 102          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF45_ARATH (Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.449e-18
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 2
Query:  260 CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGG 397
            C RCDS NTKFCYYNNY   QPRYFCK+CRRYWT GG LRN+P+GG
Sbjct:   27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGG 72          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF15_ARATH (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.587e-17
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 2
Query:  254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400
            + CPRC S  TKFCY+NNY+++QPR+FCK C+RYWT GG LRNVPVG G
Sbjct:   62 IPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAG 110          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF23_ARATH (Dof zinc finger protein DOF2.3 OS=Arabidopsis thaliana GN=DOF2.3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.073e-17
Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 2
Query:  254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400
            + CPRC S  TKFCY+NNY+++QPR+FCK C RYWT GG LRNVPVG G
Sbjct:   58 IACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAG 106          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF13_ARATH (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.536e-17
Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 2
Query:  254 LKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGG 400
            L CPRC+S +TKFCYYNNY+++QPR+FC+ C+RYWT GG++R VPVG G
Sbjct:  105 LPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSG 153          
BLAST of CF509648 vs. ExPASy Swiss-Prot
Match: DOF42_ARATH (Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.425e-12
Identity = 30/48 (62.50%), Postives = 34/48 (70.83%), Query Frame = 2
Query:  260 CPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGC 403
            CPRC S  T+F Y+NN   SQPRY CK+C R WT GG LRN+PV G C
Sbjct:   23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGIC 70          
The following BLAST results are available for this feature:
BLAST of CF509648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DOF52_ARATH8.416e-1973.47Dof zinc finger protein DOF5.2 OS=Arabidopsis thal... [more]
DOF33_ARATH8.416e-1973.47Dof zinc finger protein DOF3.3 OS=Arabidopsis thal... [more]
DOF55_ARATH2.449e-1869.39Dof zinc finger protein DOF5.5 OS=Arabidopsis thal... [more]
DOF45_ARATH2.449e-1878.26Dof zinc finger protein DOF4.5 OS=Arabidopsis thal... [more]
DOF15_ARATH1.587e-1769.39Dof zinc finger protein DOF1.5 OS=Arabidopsis thal... [more]
DOF23_ARATH2.073e-1769.39Dof zinc finger protein DOF2.3 OS=Arabidopsis thal... [more]
DOF13_ARATH3.536e-1767.35Dof zinc finger protein DOF1.3 OS=Arabidopsis thal... [more]
DOF42_ARATH3.425e-1262.50Dof zinc finger protein DOF4.2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-156 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509648 ID=CF509648; Name=CF509648; organism=Citrus sinensis; type=EST; length=607bp
AAACCATCTCTCTCTCTCTCTCTCCCTCTTGAGTCTTTCTCTTCAGCTAA
GCTAAGCTTGTCACTCTCTTAGAAAAAAAATTATAAAAATTCAACTTTGT
TTCAATTATTCTGAAGAGTGTTTGATTATTGTTGCATGGATGGATGCTTC
AAGTGGACAACATCAGGAAATGGCTACTTATTCATTGGAAAGCATGTTGG
TTTGCTCAAAAGCACAACAAGAAAGGAAGCCAAGGCCTCAACCGGAACAA
GCTCTCAAATGCCCAAGATGTGACTCCACCAACACAAAATTCTGCTACTA
CAACAACTACAGCCTCTCTCAGCCAAGATACTTCTGCAAATCTTGCAGGA
GGTATTGGACCAAAGGCGGCACACTCAGAAATGTTCCGGTGGGTGGAGGG
TGCAGGAAAAACAAACGGTCGTCATCCTCGTCATCAAAGAGAAGCCAAGA
TCAACCATTGATGAGTTCCAACACAAGCCCTCTCACCAATTTCCCTCCCT
TGAGTTATGACACCAATGACTTGAGTCTTGCATTTGCTAGGCTCCAAAAG
CAAAACGGTGGGCAACTAGGGTTTGACGATCAGCATGATTTTTCTATTTT
GGGGAAC
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