CF509651

Overview
NameCF509651
Unique NameCF509651
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length183
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOTE (Chaperone protein dnaK OS=Clostridium tetani GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAGRIAGL+VLRIINEPTAASLAYG +K + N+ ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGRIAGLEVLRIINEPTAASLAYGLDKMDTNQKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBM (Chaperone protein dnaK OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBL (Chaperone protein dnaK OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBK (Chaperone protein dnaK OS=Clostridium botulinum (strain Okra / Type B1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBJ (Chaperone protein dnaK OS=Clostridium botulinum (strain Kyoto / Type A2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOBH (Chaperone protein dnaK OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB6 (Chaperone protein dnaK OS=Clostridium botulinum (strain 657 / Type Ba4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB1 (Chaperone protein dnaK OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 48/58 (82.76%), Postives = 53/58 (91.38%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKN-NETILVFDLGGGTF 173
            PAYFNDSQR ATKDAG+IAGL+VLRIINEPTAASLAYG +K + NE ILV+DLGGGTF
Sbjct:  119 PAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKMDTNEKILVYDLGGGTF 176          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_BORRA (Chaperone protein dnaK OS=Borrelia recurrentis (strain A1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFND+QR ATKDAG+IAGLDV RI+NEPTAA+LAYG EKK+ E + V+DLGGGTF
Sbjct:  143 PAYFNDAQRQATKDAGKIAGLDVKRIVNEPTAAALAYGIEKKHEEIVAVYDLGGGTF 199          
BLAST of CF509651 vs. ExPASy Swiss-Prot
Match: DNAK_BORDL (Chaperone protein dnaK OS=Borrelia duttonii (strain Ly) GN=dnaK PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.660e-20
Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 3
Query:    3 PAYFNDSQRTATKDAGRIAGLDVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTF 173
            PAYFND+QR ATKDAG+IAGLDV RI+NEPTAA+LAYG EKK+ E + V+DLGGGTF
Sbjct:  143 PAYFNDAQRQATKDAGKIAGLDVKRIVNEPTAAALAYGIEKKHEEIVAVYDLGGGTF 199          
The following BLAST results are available for this feature:
BLAST of CF509651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_CLOTE6.660e-2082.76Chaperone protein dnaK OS=Clostridium tetani GN=dn... [more]
DNAK_CLOBM6.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBL6.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBK6.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBJ6.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOBH6.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB66.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_CLOB16.660e-2082.76Chaperone protein dnaK OS=Clostridium botulinum (s... [more]
DNAK_BORRA6.660e-2077.19Chaperone protein dnaK OS=Borrelia recurrentis (st... [more]
DNAK_BORDL6.660e-2077.19Chaperone protein dnaK OS=Borrelia duttonii (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-159 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-7_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509651 ID=CF509651; Name=CF509651; organism=Citrus sinensis; type=EST; length=183bp
TGCCTGCTTACTTCAATGATTCCCAGAGAACAGCAACAAAGGATGCTGGT
CGAATTGCTGGCTTAGATGTTCTGCGTATAATTAATGAGCCTACTGCTGC
TTCGTTGGCATATGGATTTGAAAAGAAAAACAACGAGACCATCCTAGTGT
TTGACCTTGGTGGTGGTACCTTCTTGATGTTTC
back to top