CF509674

Overview
NameCF509674
Unique NameCF509674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.168e-25
Identity = 60/162 (37.04%), Postives = 97/162 (59.88%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E+ R ++++VD  GL+    + +L  F++    + ++ K+         L+D ++  KPTILIG SG    F++EV++ M    ++PI+F LSNPTS+ E T  +   W+ G A+ A+GSPF+P  +    +   Q NN+YIFPG+GLG++   A RV D+M
Sbjct:  323 EKARSQVYMVDRWGLLQEG-MPNLLDFQQRLVQKFDNTKKWENEGNGFSLLDVMHNAKPTILIGVSGAPGLFSEEVIKEMHKHCKRPIVFPLSNPTSRVEATPNDIIRWTNGEALVATGSPFEPVVHEGRSYPIAQCNNSYIFPGIGLGVLAVNAKRVTDEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.086e-24
Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = 3
Query:   45 ETRKKIWLVDSKGLIVSS---------RLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E RK+I++VD  GL+            RL         W    E+  +L+D V     T+LIG SGQ   FT++VV  +     KP++  LSNPTS+ E T EE   W+ G A+ A+GSPF P E         Q NN+YIFPG+GLG++   A R+ D M
Sbjct:  324 EARKRIFMVDRFGLLTEGMGNLLDFQLRLAQKSADVAGWTAGTETFPQLLDVVTHAGATVLIGVSGQRGLFTEQVVRELYKHCAKPLVMPLSNPTSKVEATPEEILRWTDGNALVATGSPFAPVEINGRTVHIAQCNNSYIFPGIGLGVVACKASRITDRM 484          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.068e-24
Identity = 59/164 (35.98%), Postives = 93/164 (56.71%), Query Frame = 3
Query:   39 LEETRKKIWLVDSKGLIVSSRLESLQHFKKP----------WAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            +++ R ++++VD  G++    + +L  F+KP          W  E      L+D +    P +LIG +G    F +E++EAMA   E+P++  LSNPTS+ E   E+   W+QG+AI A+GSPF         +   Q NN+YIFPG+GLG+I + A RV ++M
Sbjct:  319 VQQARSQVFMVDRWGML-EQEMPNLLPFQKPLAQPASLRTEWQIEANREISLLDVIQHAHPDVLIGVTGVPGLFNQEIIEAMAEDCERPVVMPLSNPTSRVEAKPEDILMWTQGQAIVATGSPFPDVVLAGKRYPIAQCNNSYIFPGVGLGVISANAHRVTNEM 481          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.925e-24
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            ++ R ++++VD  GL+    + +L  F++    +H    +         L+D V   KPT+LIG SG    FT+EV++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++   A RV D+M
Sbjct:  323 KKARSQVFMVDRWGLLQEG-MPNLLDFQQRLVQKHSVTAKWETEANGFSLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 7.925e-24
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            ++ R ++++VD  GL+    + +L  F++    +H    +         L+D V   KPT+LIG SG    FT+EV++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++   A RV D+M
Sbjct:  323 KKARSQVFMVDRWGLLQEG-MPNLLDFQQRLVQKHSVTAKWETEANGFSLLDVVKNAKPTVLIGVSGAPGLFTQEVIQEMHKHCPRPIVFPLSNPTSRVEAVPADIIRWTNGDALVATGSPFDPVIHEGKTYPIVQCNNSYIFPGIGLGVLAVNAKRVTDEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.035e-23
Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLI---------VSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E+ R ++++VD  GL+            RL   +   + W  E+     L D +   KPT+L+G SG    F++E+++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++ + A RV D+M
Sbjct:  323 EQARSQVYMVDRWGLLEEGMPNLLDFQQRLVQKKANTQHWTTENNGYS-LHDVIRNAKPTVLVGVSGAPGLFSEEIIKEMHQHCPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDPVLHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.035e-23
Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLI---------VSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E+ R ++++VD  GL+            RL   +   + W  E+     L D +   KPT+L+G SG    F++E+++ M     +PI+F LSNPTS+ E    +   W+ G A+ A+GSPFDP  +    +   Q NN+YIFPG+GLG++ + A RV D+M
Sbjct:  323 EQARSQVYMVDRWGLLEEGMPNLLDFQQRLVQKKANTQHWTTENNGYS-LHDVIRNAKPTVLVGVSGAPGLFSEEIIKEMHQHCPRPIVFPLSNPTSRVEALPSDIIRWTNGEALVATGSPFDPVLHEGKTYPIVQCNNSYIFPGIGLGVLAANARRVTDEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOM_YEAST (NAD-dependent malic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=MAE1 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.709e-23
Identity = 64/162 (39.51%), Postives = 88/162 (54.32%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHE---------SVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            EE RKKI+L+D +GLI    L+S +    P  H +          + + L D V  +KPT L+G S Q   FT++VVE M   N +PIIF LSNPT   E    +   W+   A+ A+GSPF P + G  +    + NN Y FPG+GLG ++S A  + D M
Sbjct:  410 EEARKKIFLMDRRGLI----LQSYEANSTPAQHVYAKSDAEWAGINTRSLHDVVENVKPTCLVGCSTQAGAFTQDVVEEMHKHNPRPIIFPLSNPTRLHEAVPADLMKWTNNNALVATGSPFPPVD-GYRI---SENNNCYSFPGIGLGAVLSRATTITDKM 563          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOX_SCHPO (NAD-dependent malic enzyme OS=Schizosaccharomyces pombe GN=mae2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21
Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 3
Query:   33 MPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE-------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            + L++ R  ++++D  GL++    +     +KP+  +    KE       L  A+  +KPTIL+G SGQ   FT++ +  M+   E+PIIF +SNPT+  E   ++   WS G+A+ A+GSP  P       +V  Q NNA ++P LG+  ++S    + D M
Sbjct:  325 LSLDKARGNLFMIDRCGLLLERHAKIATDGQKPFLKKDSDFKEVPSGDINLESAIALVKPTILLGCSGQPGKFTEKAIREMSKHVERPIIFPISNPTTLMEAKPDQIDKWSDGKALIATGSPLPPLNRNGKKYVISQCNNALLYPALGVACVLSRCKLLSDGM 487          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.399e-20
Identity = 57/156 (36.54%), Postives = 88/156 (56.41%), Query Frame = 3
Query:   63 WLVDSKGLIVSSRLESLQHFKKPWAHEHESVKEL--------VDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNE-KPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGD-NVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            +L+D  GLI   R + +     P+A  H  ++ L         + V  +KP +L+G SG G  F +EV+ AM   +  +P IF++SNPT+ +EC   +A+  +    +FASGSPF   + G+  +    QANN Y+FPG+GLG ++SGA  + D M
Sbjct:  359 FLLDKNGLITKDR-KDIDPAALPFAKAHHEIEGLGLQEGAGLAEVVKKVKPHVLLGLSGVGGIFHEEVLRAMKESDSVRPAIFAMSNPTNNAECCPVDAFKLAGEDIVFASGSPFANVDLGNGKIGHVNQANNMYLFPGIGLGALLSGARNISDTM 513          
The following BLAST results are available for this feature:
BLAST of CF509674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_VIBHB7.168e-2537.04NAD-dependent malic enzyme OS=Vibrio harveyi (stra... [more]
MAO1_PSESM2.086e-2439.13NAD-dependent malic enzyme OS=Pseudomonas syringae... [more]
MAO12_VIBVY6.068e-2435.98NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ... [more]
MAO1_VIBVU7.925e-2437.04NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO11_VIBVY7.925e-2437.04NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_VIBCH1.035e-2335.80NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC31.035e-2335.80NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAOM_YEAST6.709e-2339.51NAD-dependent malic enzyme, mitochondrial OS=Sacch... [more]
MAOX_SCHPO1.265e-2132.52NAD-dependent malic enzyme OS=Schizosaccharomyces ... [more]
MAON_SOLTU1.399e-2036.54NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-182 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509674 ID=CF509674; Name=CF509674; organism=Citrus sinensis; type=EST; length=584bp
TCATAGCTCTTGAGATATCCAAACAGACAAATATGCCGCTAGAAGAGACT
CGCAAGAAGATTTGGCTTGTGGACTCAAAGGGATTGATCGTCAGTTCCCG
TTTAGAATCTCTCCAACATTTCAAAAAGCCGTGGGCTCATGAACATGAAT
CTGTTAAGGAACTAGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTG
ATTGGAACATCAGGACAAGGTCGAACATTTACGAAAGAAGTTGTTGAGGC
TATGGCCTCCTTGAATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAA
CTTCACAATCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGC
CGAGCCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGA
CAATGTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGAC
TTGGTTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCACGATGACATG
CTTCTGGCAGCAGCGGAAGCATTGGCTGGACAAGTACACAGGAAAACTTT
GACAAGGGACTCCTTTACCCTCCATTTAAGAACA
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