CF509674

Overview
NameCF509674
Unique NameCF509674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ECO57 (NAD-dependent malic enzyme OS=Escherichia coli O157:H7 GN=sfcA PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29
Identity = 64/162 (39.51%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E  R+K+++VD  GL+ + ++ +L  F+     + E++ +         L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M
Sbjct:  326 EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDRDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ECO55 (NAD-dependent malic enzyme OS=Escherichia coli (strain 55989 / EAEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29
Identity = 64/162 (39.51%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E  R+K+++VD  GL+ + ++ +L  F+     + E++ +         L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M
Sbjct:  326 EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ECO45 (NAD-dependent malic enzyme OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29
Identity = 64/162 (39.51%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E  R+K+++VD  GL+ + ++ +L  F+     + E++ +         L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M
Sbjct:  326 EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ECO27 (NAD-dependent malic enzyme OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29
Identity = 64/162 (39.51%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E  R+K+++VD  GL+ + ++ +L  F+     + E++ +         L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M
Sbjct:  326 EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ECO24 (NAD-dependent malic enzyme OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=sfcA PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.265e-29
Identity = 64/162 (39.51%), Postives = 101/162 (62.35%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E  R+K+++VD  GL+ + ++ +L  F+     + E++ +         L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF+P  + D ++   Q NNA+IFPG+GLG+I SGA R+ D+M
Sbjct:  326 EAARQKVFMVDRFGLL-TDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVVWKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPW (NAD-dependent malic enzyme OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.182e-29
Identity = 66/161 (40.99%), Postives = 103/161 (63.98%), Query Frame = 3
Query:   45 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            + RK++++VD  G++  S + +L  F++  A + + +           L+D VN  KPTILIG SG    F++E+++AM S  E+PI+F LSNPTS+ E T ++   W++G+A+ A+GSPF+P    D  +   Q NN+YIFPG+GLG++ +GA RV D M
Sbjct:  324 QARKQVFMVDRWGML-QSNMPNLLPFQQKLAQDCDDITNWDNFSENISLLDVVNNAKPTILIGVSGAPGLFSEEIIKAMHSHCERPIVFPLSNPTSRVEATPKDILHWTKGQALVATGSPFEPVVVDDITYEIAQCNNSYIFPGIGLGVLAAGAERVSDAM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.182e-29
Identity = 69/169 (40.83%), Postives = 99/169 (58.58%), Query Frame = 3
Query:   21 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            K   +  E+ R +I++VD  GL+ + +L +L  F+     +  S+ +         L+D V   KPT+LIG SGQ   FT+E++  M    E+PI+  LSNPTS+ E   E+   W+ G A+ A+GSPF+P +Y D  +   Q NNAYIFPG+GLG+I SGA  V D M
Sbjct:  319 KSEGLSDEQARARIFMVDRFGLL-TDKLPNLLDFQNKLVQKSSSLAKWDVNNDSISLLDVVRNAKPTVLIGVSGQAGLFTEEIIREMHKHCERPIVMPLSNPTSRVEARPEDIINWTDGAALVATGSPFNPVKYKDQEYPIAQCNNAYIFPGIGLGVIASGAKLVTDGM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SALTY (NAD-dependent malic enzyme OS=Salmonella typhimurium GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 72/182 (39.56%), Postives = 105/182 (57.69%), Query Frame = 3
Query:    3 IALEISKQTN---MPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IA +I  QT    +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M
Sbjct:  310 IAEQIIAQTQREGLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SALTI (NAD-dependent malic enzyme OS=Salmonella typhi GN=sfcA PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 72/182 (39.56%), Postives = 105/182 (57.69%), Query Frame = 3
Query:    3 IALEISKQTN---MPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IA +I  QT    +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M
Sbjct:  310 IAEQIIAQTQREGLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SALSV (NAD-dependent malic enzyme OS=Salmonella schwarzengrund (strain CVM19633) GN=sfcA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 72/182 (39.56%), Postives = 105/182 (57.69%), Query Frame = 3
Query:    3 IALEISKQTN---MPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IA +I  QT    +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D V+   Q NNAYIFPG+GLG+I SGA R+ D+M
Sbjct:  310 IAEQIIAQTQREGLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKVYPIAQCNNAYIFPGIGLGVIASGASRITDEM 486          
The following BLAST results are available for this feature:
BLAST of CF509674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_ECO576.265e-2939.51NAD-dependent malic enzyme OS=Escherichia coli O15... [more]
MAO1_ECO556.265e-2939.51NAD-dependent malic enzyme OS=Escherichia coli (st... [more]
MAO1_ECO456.265e-2939.51NAD-dependent malic enzyme OS=Escherichia coli O45... [more]
MAO1_ECO276.265e-2939.51NAD-dependent malic enzyme OS=Escherichia coli O12... [more]
MAO1_ECO246.265e-2939.51NAD-dependent malic enzyme OS=Escherichia coli O13... [more]
MAO1_SHEPW8.182e-2940.99NAD-dependent malic enzyme OS=Shewanella piezotole... [more]
MAO1_PHOLL8.182e-2940.83NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]
MAO1_SALTY1.069e-2839.56NAD-dependent malic enzyme OS=Salmonella typhimuri... [more]
MAO1_SALTI1.069e-2839.56NAD-dependent malic enzyme OS=Salmonella typhi GN=... [more]
MAO1_SALSV1.069e-2839.56NAD-dependent malic enzyme OS=Salmonella schwarzen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-182 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509674 ID=CF509674; Name=CF509674; organism=Citrus sinensis; type=EST; length=584bp
TCATAGCTCTTGAGATATCCAAACAGACAAATATGCCGCTAGAAGAGACT
CGCAAGAAGATTTGGCTTGTGGACTCAAAGGGATTGATCGTCAGTTCCCG
TTTAGAATCTCTCCAACATTTCAAAAAGCCGTGGGCTCATGAACATGAAT
CTGTTAAGGAACTAGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTG
ATTGGAACATCAGGACAAGGTCGAACATTTACGAAAGAAGTTGTTGAGGC
TATGGCCTCCTTGAATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAA
CTTCACAATCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGC
CGAGCCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGA
CAATGTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGAC
TTGGTTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCACGATGACATG
CTTCTGGCAGCAGCGGAAGCATTGGCTGGACAAGTACACAGGAAAACTTT
GACAAGGGACTCCTTTACCCTCCATTTAAGAACA
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