CF509674

Overview
NameCF509674
Unique NameCF509674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SALDC (NAD-dependent malic enzyme OS=Salmonella dublin (strain CT_02021853) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.396e-28
Identity = 71/182 (39.01%), Postives = 105/182 (57.69%), Query Frame = 3
Query:    3 IALEISKQTN---MPLEETRKKIWLVDSKGLIVS-------------SRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            IA +I  QT    +  +  R+ +++VD  GL+                + ++LQH    W  E++ V  L+D V  +KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T ++   W++G A+ A+GSPF P  + D ++   Q NNAYIFPG+GLG+I SGA R+ D+M
Sbjct:  310 IAEQIIAQTQREGLSEDAARQNVFMVDRFGLLTDRMPNLLPFQAKLVQKCDNLQH----WDTEND-VLSLLDVVRNVKPDILIGVSGQTGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFSPVIWKDKIYPIAQCNNAYIFPGIGLGVIASGASRITDEM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.396e-28
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 3
Query:   21 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            K   +  EE R ++++VD  GL+ + +L +L  F+     + E +           L++ V   KPTILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E   E+   W++G A+ A+GSPF P  Y D VF   Q NN+YIFPG+GLG++ SGA R+ D M
Sbjct:  319 KSEGLSDEEARARVFMVDRFGLL-TDKLPNLLDFQSKLVQKSELLANWDCNSDAISLLEVVRNAKPTILIGVSGQPGLFTEEIIREMHKHCARPIVMPLSNPTSRVEARPEDIIRWTEGAALVATGSPFSPVNYQDKVFPIAQCNNSYIFPGIGLGVLASGAKRITDGM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SHEWM (NAD-dependent malic enzyme OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.823e-28
Identity = 63/161 (39.13%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   45 ETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            + R ++++VD  GL+    + +L +F++  A + ++VK+         L+D +N  KPT+LIG SG    F++E+++AM     +PI+F LSNPTS+ E T ++   W+ G+A+ A+GSPF+P       F   Q NN+YIFPG+GLG++ +GA RV D+M
Sbjct:  324 QARSQVFMVDRWGLL-QDNMPNLLNFQEKLAQKTQAVKDWTIENGNISLLDVMNNAKPTVLIGVSGAPGLFSEEIIKAMHQHCPRPIVFPLSNPTSRVEATPKDVLHWTNGQALVATGSPFEPVALNGETFEIAQCNNSYIFPGIGLGVLSAGAKRVSDEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_SHESH (NAD-dependent malic enzyme OS=Shewanella sediminis (strain HAW-EB3) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28
Identity = 64/162 (39.51%), Postives = 103/162 (63.58%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E+ R ++++VD  GL+    + +L  F++  A + + ++          L+D VN  KPT+LIG SG    F++E+++AM S   +PI+F LSNPTS+ E T ++   W++G+A+ A+GSPF+P    D  F   Q NN+YIFPG+GLG++ +GA RV ++M
Sbjct:  323 EQARAQVFMVDRWGLL-QDNMPTLLPFQQKLAQKCDDIEGWDNFSENISLLDVVNNAKPTVLIGVSGAPGVFSEEIIKAMHSHCPRPIVFPLSNPTSRVEATPKDLLHWTKGQALVATGSPFEPVVVEDETFEIAQCNNSYIFPGIGLGVLAAGAKRVSNEM 483          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_PSYA2 (NAD-dependent malic enzyme OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28
Identity = 66/161 (40.99%), Postives = 96/161 (59.63%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE--------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E+ RK++++VD  GL+  S  E LQ F+ P   +  +++         L   V   K T+L G SGQ   FT+EV+EA+    E PI+  LSNPTS+ E T +E  +WS+G+AI A+GSPF    + D  F   Q NN+YIFPG+GLG++ + A  + D+M
Sbjct:  322 EQARKQVFMVDRYGLLTDSMTE-LQKFQAPLVQKESAIESWDKSQKLGLAQVVKQAKITVLFGVSGQKGLFTREVIEALCVNTEHPIVLPLSNPTSRVEATPQEVTSWSRGKAIVATGSPFPNTTFEDQSFEISQCNNSYIFPGIGLGVLAAHATGISDNM 481          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.381e-28
Identity = 68/169 (40.24%), Postives = 100/169 (59.17%), Query Frame = 3
Query:   21 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE---------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            K   +  E+ R +I++VD  GL+ + +L +L  F+     + E++ +         L++ V   KPTILIG SGQ   FT+E++  M    E+P +  LSNPTS+ E   E+   W+ G+A+ A+GSPF P  Y + V+   Q NN+YIFPG+GLG+I SGA RV D M
Sbjct:  319 KSEGLSDEQARARIFMVDRFGLL-TDKLPNLLDFQSKLIQKSETLADWQTETDAISLLEVVKNAKPTILIGVSGQAGLFTEEIIREMHKHCERPTVMPLSNPTSRVEARPEDIINWTDGQALVATGSPFAPVTYKEKVYPIAQCNNSYIFPGIGLGVIASGAKRVTDAM 486          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MLES_LACLA (Malolactic enzyme OS=Lactococcus lactis subsp. lactis GN=mleS PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.109e-28
Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKE------LVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            EE  K  +++D +GL+    +E L   +KP+A +    K+      L++ V  +KPTIL+GTS     FTKEVVEAM +  E+P+IF +SNPT + E TAE+   WS G+A  A+G P     Y    +  GQANN+ I+PGLGLG++ S A  + D+M
Sbjct:  314 EEAYKHFFMIDQQGLLFDD-MEDLTPAQKPFAKKRADYKDAGDMTDLLNVVKTVKPTILVGTSTNPGAFTKEVVEAMCANTERPVIFPISNPTKKMETTAEQVIEWSDGKAFVATGVPSGTISYKGVDYQIGQANNSLIYPGLGLGMLASEAKLLTDEM 471          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.061e-28
Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRV 488
            EE   + ++ D KGL+   R + L   +     E E  K   + +  IKPT L+G S   + F KE++  +AS  EKP IF LSNPTS+SECTAEEA  ++ G  IFASGSPFDP E+        Q NN+Y FPG+GLGL+ S A RV
Sbjct:  359 EEAYAQFYMFDHKGLLGKGRDDLLPSQQVFMRKEIEGGKTPAELLKKIKPTCLLGLSTCPKLFNKEMLSYVASYCEKPGIFPLSNPTSRSECTAEEAVEFTDGNLIFASGSPFDPVEWKGKTIQTNQCNNSYSFPGIGLGLVSSRATRV 507          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.061e-28
Identity = 66/162 (40.74%), Postives = 94/162 (58.02%), Query Frame = 3
Query:   42 EETRKKIWLVDSKGLIVS---------SRLESLQHFKKPWAHEHESVKELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            E+ R ++++VD  GL+           S+L   +   K W  + +S+  L+D V   KP ILIG SGQ   FT+E++  M     +PI+  LSNPTS+ E T  +   W+ G A+ A+GSPF P    +  +   Q NNAYIFPG+GLG+I SGA+RV D+M
Sbjct:  327 EQARARVFMVDRFGLLTDNMPNLLSFQSKLVQKRDSLKGWDTQSDSIS-LLDVVRNAKPDILIGVSGQTGLFTEEIIREMHKHCARPIVMPLSNPTSRVEATPHDILNWTDGAALVATGSPFQPVTVKEKTYPIAQCNNAYIFPGIGLGIISSGALRVTDEM 487          
BLAST of CF509674 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.304e-28
Identity = 68/169 (40.24%), Postives = 98/169 (57.99%), Query Frame = 3
Query:   21 KQTNMPLEETRKKIWLVDSKGLIVSSRLESLQHFKKPWAHEHESVK---------ELVDAVNAIKPTILIGTSGQGRTFTKEVVEAMASLNEKPIIFSLSNPTSQSECTAEEAYTWSQGRAIFASGSPFDPFEYGDNVFVPGQANNAYIFPGLGLGLIMSGAIRVHDDM 500
            K   +  EE R ++++VD  GL+ + RL +L +F+     + +S+           L+D V   KP I+IG SGQ   F++E+V  M     +PII  LSNPTS+ E T ++   W+ G A+ A+GSPF P  + D  +   Q NN+YIFPG+GLG+I SGA RV D M
Sbjct:  319 KSEGLSDEEARARVFMVDRFGLL-TDRLPNLLNFQSRLVQKSDSLSGWDSANDSLSLLDVVRNAKPDIMIGVSGQPGLFSEEIVREMHKHCTRPIIMPLSNPTSRVEATPQDIMAWTDGCALVATGSPFSPVSWKDKTYPIAQCNNSYIFPGIGLGVIASGASRVTDSM 486          
The following BLAST results are available for this feature:
BLAST of CF509674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
MAO1_SALDC1.396e-2839.01NAD-dependent malic enzyme OS=Salmonella dublin (s... [more]
MAO1_PECCP1.396e-2840.24NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_SHEWM1.823e-2839.13NAD-dependent malic enzyme OS=Shewanella woodyi (s... [more]
MAO1_SHESH2.381e-2839.51NAD-dependent malic enzyme OS=Shewanella sediminis... [more]
MAO1_PSYA22.381e-2840.99NAD-dependent malic enzyme OS=Psychrobacter arctic... [more]
MAO1_PROMH2.381e-2840.24NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MLES_LACLA3.109e-2842.14Malolactic enzyme OS=Lactococcus lactis subsp. lac... [more]
MAOH_NEOFR4.061e-2846.31Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAO1_ENTS84.061e-2840.74NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_ERWT95.304e-2840.24NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-182 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509674 ID=CF509674; Name=CF509674; organism=Citrus sinensis; type=EST; length=584bp
TCATAGCTCTTGAGATATCCAAACAGACAAATATGCCGCTAGAAGAGACT
CGCAAGAAGATTTGGCTTGTGGACTCAAAGGGATTGATCGTCAGTTCCCG
TTTAGAATCTCTCCAACATTTCAAAAAGCCGTGGGCTCATGAACATGAAT
CTGTTAAGGAACTAGTAGATGCCGTTAATGCAATCAAGCCAACAATTCTG
ATTGGAACATCAGGACAAGGTCGAACATTTACGAAAGAAGTTGTTGAGGC
TATGGCCTCCTTGAATGAGAAACCCATTATTTTTTCTCTTTCCAACCCAA
CTTCACAATCTGAATGCACCGCAGAAGAAGCCTATACGTGGAGCCAGGGC
CGAGCCATTTTTGCAAGTGGGAGCCCCTTTGACCCTTTCGAATATGGGGA
CAATGTTTTTGTGCCTGGCCAGGCAAATAATGCATACATTTTCCCTGGAC
TTGGTTTGGGGTTAATAATGTCTGGTGCAATCCGTGTTCACGATGACATG
CTTCTGGCAGCAGCGGAAGCATTGGCTGGACAAGTACACAGGAAAACTTT
GACAAGGGACTCCTTTACCCTCCATTTAAGAACA
back to top