CF509676

Overview
NameCF509676
Unique NameCF509676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71
Identity = 134/229 (58.52%), Postives = 166/229 (72.49%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD++LTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAE+NKG R+LVVCSEIT   FRGP+    D+L+ Q LF            P   +E PL++LVS++QTI+P++D  +   LRE+GLTFH  + VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V            A+R VLSEYG
Sbjct:  115 KEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFRLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRILVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAAMIVGTDPRPDLETPLFELVSSAQTIVPNTDSHLKLTLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGAQRFRASRDVLSEYG 343          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.152e-71
Identity = 137/229 (59.83%), Postives = 160/229 (69.87%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWG+P S+ITHL+FCT+SGVDMPGAD+QL KLLGL  SV R MMYQQGC AG  +LRLAKDLAENNKG RVLVVCSE+    FRGP+    D L+ Q LF            P   +E PL++LVS +QT +PD+D  +  HLRE+GLTFH  K VP LI++N+E  L +AF P GISDWNSIFWI HPGG AILD+V            A+R VLSE G
Sbjct:  110 KEAAMKAIKEWGRPISEITHLVFCTSSGVDMPGADFQLAKLLGLSSSVNRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLNVFRGPSLEQEDYLLAQCLFGDGSAAVIVGTEPRPGLETPLFELVSAAQTTIPDTDSHLKLHLREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRVEEKLGLEPEKLRASRDVLSESG 338          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.805e-66
Identity = 127/230 (55.22%), Postives = 160/230 (69.57%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPD-TSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            +EAA KAI EWGQP SKITH++F TTSG  MPGADY +T+LLGL  +V+R M+Y QGCFAGGT LR+AKDLAENN+GARVLVVC+E TA+TF  P ++HLD +VGQA+F            PD  S ER ++ ++S SQTI+P SDGAI  H  E+G+++ L +DV  L   NI   + EAF+P+G+SDWNS+F+  HPGG  I+D V            ATR VL EYG
Sbjct:  110 QEAALKAIAEWGQPISKITHVVFATTSGFMMPGADYVITRLLGLNRTVRRVMLYNQGCFAGGTALRVAKDLAENNEGARVLVVCAENTAMTFHAPNESHLDVIVGQAMFSDGAAALIIGACPDVASGERAVFNILSASQTIVPGSDGAITAHFYEMGMSYFLKEDVIPLFRDNIAAVMEEAFSPLGVSDWNSLFYSIHPGGRGIIDGVAGNLGIKDENLVATRHVLGEYG 339          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.996e-65
Identity = 123/233 (52.79%), Postives = 158/233 (67.81%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI----EKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            K AA  AI EWGQPKS ITHLIFCT+SG+DMPGAD+ L KLLGLRP+V R M+YQQGCFAG TVLR+AKDLAENNKG+R+LVVCSE+T ++FRGP + H ++LVGQALF            P    E   +++     +++PDSD A+ G+++E GL  HL K +P LI +NI    + +L E F     S +N +FW+ HPGGPAILD V            A+R++LS+YG
Sbjct:  114 KVAADNAIAEWGQPKSNITHLIFCTSSGIDMPGADWALMKLLGLRPTVNRVMVYQQGCFAGCTVLRIAKDLAENNKGSRILVVCSELTLISFRGPTEDHPENLVGQALFGDGAAALIVGADPIPHAENASFEIHWARSSVVPDSDDAVTGNIKENGLVLHLSKTIPDLIGQNIHTLLKDALEEMFDACNPSSFNDLFWVIHPGGPAILDAVEEELNLKSERTHASREILSQYG 346          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18
Identity = 62/234 (26.50%), Postives = 107/234 (45.73%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIF-----WIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            ++A  +A+K+WG  K  ITH++  T++G+ +P  +++L  LLGL   V+R  +   GC AG + LR A  LA+ +   R+LVVC+E+ ++ F        D +V  ++F            P    E PLY+++ +     P+++ A+   L + G    L   +P +I   IE  +        +    +I      ++ H GG +IL  +             T  V   YG
Sbjct: 2873 QQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRIE-ETPLYEVMCSINRSFPNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYG 3103          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: PKS37_DICDI (Probable polyketide synthase 37 OS=Dictyostelium discoideum GN=stlB PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 56/227 (24.67%), Postives = 98/227 (43.17%), Query Frame = 2
Query:    8 AATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            A    I+  G     I+H++  T++G+  P  D  L   LGL  +  R M+   GC A    +R A   A+   G  VLVV  E +A   +   D+  D L+ QA+F            P +S+   L +++     ++PDS  A++  +   G+   L  ++P  I+++I  +++       +   +  F+  HPGG  I+  V             + +V+  YG
Sbjct: 2692 AGKTVIERAGIDPMLISHVVGVTSTGIMAPSFDVVLIDKLGLSINTSRTMINFMGCGAAVNSMRAATAYAKLKPGTFVLVVAVEASATCMKFNFDSRSD-LLSQAIFTDGCVATLVTCQPKSSLVGKL-EIIDDLSYLMPDSRDALNLFIGPTGIDLDLRPELPIAINRHINSAITSWLKKNSLQKSDIEFFATHPGGAKIISAVHEGLGLSPEDLSDSYEVMKRYG 2916          
The following BLAST results are available for this feature:
BLAST of CF509676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSB_IPOTR3.179e-7158.52Chalcone synthase B (Fragment) OS=Ipomoea triloba ... [more]
CHSA_IPONI4.152e-7159.83Chalcone synthase A (Fragment) OS=Ipomoea nil GN=C... [more]
TBSYN_HYPAN1.805e-6655.22Trihydroxybenzophenone synthase OS=Hypericum andro... [more]
VPS_PSINU1.996e-6552.79Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
PKS1_DICDI2.391e-1826.50Probable polyketide synthase 1 OS=Dictyostelium di... [more]
PKS37_DICDI1.960e-1224.67Probable polyketide synthase 37 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-184 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509676 ID=CF509676; Name=CF509676; organism=Citrus sinensis; type=EST; length=693bp
GAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTA
AGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGC
GCCGACTACCAGCTCACCAAACTGCTCGGCCTGCGCCCTTCCGTCAAGCG
CTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGCC
TCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTC
TGTTCGGAGATCACGGCGGTCACTTTCCGCGGCCCTGCCGATACTCATCT
TGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCTGTGA
TCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATCAGCTT
GTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATTGACGG
ACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGTCCCCG
GCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCGCCCCG
GTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCCGGTGG
GCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGAGGAGA
AGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTACATG
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