CF509676

Overview
NameCF509676
Unique NameCF509676
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS5_SOYBN (Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.758e-102
Identity = 189/229 (82.53%), Postives = 197/229 (86.03%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VE+PL+QLV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYG 334          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS1_SOYBN (Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.758e-102
Identity = 189/229 (82.53%), Postives = 197/229 (86.03%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VE+PL+QLV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYG 334          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS1_CITSI (Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.758e-102
Identity = 182/228 (79.82%), Postives = 197/228 (86.40%), Query Frame = 2
Query:    5 EAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            +AAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADY+LTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            P   +E+P+++LVST+QTILPDSDG+IDGHLRE GLTFHLLKDVPGLISKNI+KSL+EAF P+GISDWNSIFWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KAATEAIKEWGQPKSKITHLVFCTTSGVDMPGADYRLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGADPIPEIEKPMFELVSTAQTILPDSDGSIDGHLREAGLTFHLLKDVPGLISKNIQKSLTEAFKPLGISDWNSIFWIAHPGGPAILDQVEEKLGLKPEKLRATRHVLSEYG 334          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHSY_RAPSA (Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.323e-101
Identity = 183/230 (79.57%), Postives = 196/230 (85.22%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF            PD S  E+P++++VS +QTILPDSDGAIDGHLREVG+TFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYG
Sbjct:  111 KEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDVSAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGITFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYG 340          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.257e-101
Identity = 184/229 (80.35%), Postives = 194/229 (84.72%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQ+LF            P   VE+PL++LVS +QTILP SDGAIDGHLREVGLTFHLLKDVP LIS N+EKSL EAF P+GISDWNS+FWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQSLFGDGAAAIIIGSDPIPEVEKPLFELVSAAQTILPSSDGAIDGHLREVGLTFHLLKDVPRLISMNVEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYG 335          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS3_SOYBN (Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV=1)

HSP 1 Score: 367.081 bits (941), Expect = 5.028e-101
Identity = 188/229 (82.10%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP DTHLDSLVGQALF            P   VE+PL+QLV T+QTILPDS+GAIDGHL EVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NSIFWIAHPGGPAILDQV            ATR VLSEYG
Sbjct:  107 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTHLDSLVGQALFGDGAAAVIVGSDP-LPVEKPLFQLVWTAQTILPDSEGAIDGHLGEVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEAKLGLKPEKMEATRHVLSEYG 334          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS4_SORBI (Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=3 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.577e-101
Identity = 181/229 (79.04%), Postives = 196/229 (85.59%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            K AA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTK+LGLRPSVKR MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+++HLDS+VGQALF            PD  VERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE+SL EAF P+GI+D+NSIFW+AHPGGPAILDQV            ATR VLSEYG
Sbjct:  111 KAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGPAILDQVEAKVGLKKERMRATRHVLSEYG 339          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.577e-101
Identity = 180/229 (78.60%), Postives = 194/229 (84.72%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            K AA KAIKEWGQP+SKITHL+FCTTSGVDMPGADYQLTK+LGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP ++HLDSLVGQALF            PD S+ERPL+QLVS SQTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIE++L +AF P+GI DWNS+FWIAHPGGPAILD V            ATR VLSEYG
Sbjct:  110 KAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPHESHLDSLVGQALFGDGAAAVIIGADPDESIERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERALEDAFKPLGIDDWNSVFWIAHPGGPAILDMVEAKVNLNKERMRATRHVLSEYG 338          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 8.577e-101
Identity = 183/230 (79.57%), Postives = 195/230 (84.78%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQALF             D S  E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD V            ATR VLSEYG
Sbjct:  112 KEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDADISAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYG 341          
BLAST of CF509676 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.120e-100
Identity = 183/229 (79.91%), Postives = 194/229 (84.72%), Query Frame = 2
Query:    2 KEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYG 688
            KEAATKAIKEWGQPKSKITH+IFCTTSGVDMPGADYQLTKLLGLRPSVKR MMYQQGCFAGGTVLR+AKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDS+VGQALF            P   VE+P ++L+ T+QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF   GISDWN +FWIAHPGGPAILDQV            ATRQVLSEYG
Sbjct:  112 KEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSMVGQALFGDGAAALIVGADPIPQVEKPCFELMWTAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFQQFGISDWNQLFWIAHPGGPAILDQVEAKLNLDPKKLRATRQVLSEYG 340          
The following BLAST results are available for this feature:
BLAST of CF509676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHS5_SOYBN7.758e-10282.53Chalcone synthase 5 OS=Glycine max GN=CHS5 PE=3 SV... [more]
CHS1_SOYBN7.758e-10282.53Chalcone synthase 1 OS=Glycine max GN=CHS1 PE=3 SV... [more]
CHS1_CITSI7.758e-10279.82Chalcone synthase 1 OS=Citrus sinensis GN=CHS1 PE=... [more]
CHSY_RAPSA1.323e-10179.57Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 ... [more]
CHS3_CAMSI2.257e-10180.35Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHS3_SOYBN5.028e-10182.10Chalcone synthase 3 OS=Glycine max GN=CHS3 PE=3 SV... [more]
CHS4_SORBI8.577e-10179.04Chalcone synthase 4 OS=Sorghum bicolor GN=CHS4 PE=... [more]
CHS2_SECCE8.577e-10178.60Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SINAL8.577e-10179.57Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHS7_PICMA1.120e-10079.91Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-184 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509676 ID=CF509676; Name=CF509676; organism=Citrus sinensis; type=EST; length=693bp
GAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTA
AGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGC
GCCGACTACCAGCTCACCAAACTGCTCGGCCTGCGCCCTTCCGTCAAGCG
CTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTTCGCC
TCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGTTGTC
TGTTCGGAGATCACGGCGGTCACTTTCCGCGGCCCTGCCGATACTCATCT
TGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCTGTGA
TCGTGGGTGCCGATCCTGACACGTCGGTCGAGCGTCCGTTGTATCAGCTT
GTGTCGACTTCGCAGACGATCCTCCCTGACTCTGACGGTGCAATTGACGG
ACACTTGCGCGAAGTCGGTCTCACTTTCCATTTGCTTAAAGACGTCCCCG
GCTTGATCTCAAAGAATATAGAGAAAAGCCTGTCGGAAGCGTTCGCCCCG
GTTGGCATCAGCGACTGGAACTCGATATTCTGGATCGCTCACCCCGGTGG
GCCCGCAATTCTGGACCAAGTGGAGTCTAAACTCGGCCTCAAAGAGGAGA
AGCTGAAGGCCACACGTCAAGTGTTGAGTGAGTACGGTACATG
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