CF509681

Overview
NameCF509681
Unique NameCF509681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length453
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_PIG (60S ribosomal protein L11 OS=Sus scrofa GN=RPL11 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 7.247e-56
Identity = 105/130 (80.77%), Postives = 118/130 (90.77%), Query Frame = 2 
Query:   62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGY 451
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL RPG+
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF 139
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_MOUSE (60S ribosomal protein L11 OS=Mus musculus GN=Rpl11 PE=1 SV=4)

HSP 1 Score: 215.698 bits (548), Expect = 7.247e-56
Identity = 105/130 (80.77%), Postives = 118/130 (90.77%), Query Frame = 2 
Query:   62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGY 451
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL RPG+
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF 139
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_ICTPU (60S ribosomal protein L11 OS=Ictalurus punctatus GN=rpl11 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 7.247e-56
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 2 
Query:   50 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGY 451
            +K  NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSD+G FGFGIQEHIDLGIKYDPS GIYG+DF+VVL RPG+
Sbjct:    6 EKKENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDSGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF 139
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_HUMAN (60S ribosomal protein L11 OS=Homo sapiens GN=RPL11 PE=1 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 7.247e-56
Identity = 105/130 (80.77%), Postives = 118/130 (90.77%), Query Frame = 2 
Query:   62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGY 451
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL RPG+
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF 139
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_CHILA (60S ribosomal protein L11 OS=Chinchilla lanigera GN=RPL11 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 7.247e-56
Identity = 105/130 (80.77%), Postives = 118/130 (90.77%), Query Frame = 2 
Query:   62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGY 451
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL RPG+
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF 139
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_BOVIN (60S ribosomal protein L11 OS=Bos taurus GN=RPL11 PE=2 SV=3)

HSP 1 Score: 215.698 bits (548), Expect = 7.247e-56
Identity = 105/130 (80.77%), Postives = 118/130 (90.77%), Query Frame = 2 
Query:   62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGY 451
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL RPG+
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGF 139
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_CAEEL (60S ribosomal protein L11 OS=Caenorhabditis elegans GN=rpl-11.1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 9.465e-56
Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = 2 
Query:   47 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPG 448
            EKK  N MRE+K+QKL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRRNEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FGFG+QEHIDLGIKYDP  GIYGMDF+VVL R G
Sbjct:   12 EKKGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIGIYGMDFYVVLNRNG 145
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11B_YEAST (60S ribosomal protein L11-B OS=Saccharomyces cerevisiae GN=RPL11B PE=1 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 6.135e-55
Identity = 105/132 (79.55%), Postives = 118/132 (89.39%), Query Frame = 2 
Query:   53 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPG 448
            K  NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L  RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ RPG
Sbjct:    4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPG 135
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11A_YEAST (60S ribosomal protein L11-A OS=Saccharomyces cerevisiae GN=RPL11A PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 6.135e-55
Identity = 105/132 (79.55%), Postives = 118/132 (89.39%), Query Frame = 2 
Query:   53 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPG 448
            K  NPMR++K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L  RNFS TG FGFGI EHIDLGIKYDPS GI+GMDF+VV+ RPG
Sbjct:    4 KAQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFGMDFYVVMNRPG 135
[Close]
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL11_CANGA (60S ribosomal protein L11 OS=Candida glabrata GN=RPL11 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 8.013e-55
Identity = 105/132 (79.55%), Postives = 118/132 (89.39%), Query Frame = 2 
Query:   53 KLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPG 448
            K  N MRE+K++KLVLNISVGESGDRLTRA+KVLEQLSGQTPV SKARYTVR+FGIRRNEKIA +VTVRG KA ++LE GLKVKEY+L  RNFS TG FGFGIQEHIDLGIKYDPS GI+GMDF++V+ RPG
Sbjct:    4 KTQNVMRELKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYQLRNRNFSTTGNFGFGIQEHIDLGIKYDPSIGIFGMDFYIVMGRPG 135
The following BLAST results are available for this feature:
BLAST of CF509681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
RL11_PIG7.247e-5680.7760S ribosomal protein L11 OS=Sus scrofa GN=RPL11 P... [more]
RL11_MOUSE7.247e-5680.7760S ribosomal protein L11 OS=Mus musculus GN=Rpl11... [more]
RL11_ICTPU7.247e-5678.3660S ribosomal protein L11 OS=Ictalurus punctatus G... [more]
RL11_HUMAN7.247e-5680.7760S ribosomal protein L11 OS=Homo sapiens GN=RPL11... [more]
RL11_CHILA7.247e-5680.7760S ribosomal protein L11 OS=Chinchilla lanigera G... [more]
RL11_BOVIN7.247e-5680.7760S ribosomal protein L11 OS=Bos taurus GN=RPL11 P... [more]
RL11_CAEEL9.465e-5679.8560S ribosomal protein L11 OS=Caenorhabditis elegan... [more]
RL11B_YEAST6.135e-5579.5560S ribosomal protein L11-B OS=Saccharomyces cerev... [more]
RL11A_YEAST6.135e-5579.5560S ribosomal protein L11-A OS=Saccharomyces cerev... [more]
RL11_CANGA8.013e-5579.5560S ribosomal protein L11 OS=Candida glabrata GN=R... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-189 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509681 ID=CF509681; Name=CF509681; organism=Citrus sinensis; type=EST; length=453bp
CTGAGCAGCGGCAGTAACTCATCATCAGCAAACCCGAATGGCTTCAGAGA
AGAAACTTTCGAACCCCATGAGGGAAATTAAGGTTCAGAAGCTTGTGCTC
AACATCTCCGTTGGTGAAAGTGGAGATCGTCTCACCAGAGCCGCTAAGGT
GCTGGAGCAACTCAGTGGACAGACACCTGTTTTCTCCAAGGCCAGGTACA
CTGTTCGGTCTTTTGGGATCAGACGTAATGAGAAGATTGCATGCTATGTG
ACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGATTGAAGGT
GAAGGAATATGAGCTTCTGCGTCGGAATTTCAGTGACACTGGCTGTTTTG
GCTTTGGTATTCAAGAGCATATTGATCTTGGAATCAAGTATGATCCTTCC
ACTGGAATTTATGGTATGGATTTCTTTGTGGTTCTGGAGCGCCCGGGTTA
TCG
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