CF509681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_ERWCT (50S ribosomal protein L5 OS=Erwinia carotovora subsp. atroseptica GN=rplE PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 7.102e-11 Identity = 44/142 (30.99%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 35 RMASEKKLSNPMREIKVQKLVLNISVGES-GDR--LTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 430 ++ +E ++ M+ +V+K+ LN+ VGE+ D+ L AA L +SGQ P+ +KAR +V F IR+ I C VT+RG++ + LE + +++++ L ++F G + G++E I I YD + G+D + Sbjct: 15 KLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFLERLISIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITI 156
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_RICTY (50S ribosomal protein L5 OS=Rickettsia typhi GN=rplE PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11 Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 2 Query: 80 KVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVV 433 +++K+V+N+ VGE+ + A L +SGQ P+ + AR ++ +F +R N KI C VT+R D+ LE + +VKE+ ++F G F FG++E I I YD I GMD +V Sbjct: 30 QIKKIVINMGVGEAIADSKVINNALNDLTLISGQKPIVTLARKSIATFKLRENMKIGCKVTLRKDRMYDFLERLVIVALPRVKEFRGFSYKSFDGKGNFTFGLKEQIVFPEINYDKIDTIRGMDITIV 157
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_CAUCR (50S ribosomal protein L5 OS=Caulobacter crescentus GN=rplE PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11 Identity = 44/149 (29.53%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 20 HHQQTRMASEKKL--SNPMREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYELLR-RNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 430 + ++ R A +++ +N M+ K+ K+VLN+ +GE+ + A K L+ ++GQ PV +KAR ++ F +R + VT+R D+ + L+ + +VK++ L ++F G + G++EH+ I YD I+GMD V Sbjct: 14 YRERIRAAMKEQFGYTNEMQIPKLDKIVLNMGIGEAVADSKKAQTALKDLQAIAGQKPVATKARKSIAGFKLREGMVVGAKVTLRKDRMYEFLDRLVTIALPRVKDFRGLNGKSFDGRGNYAMGLKEHLVFPEINYDQIEQIWGMDIIV 162
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_CAUCN (50S ribosomal protein L5 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplE PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11 Identity = 44/149 (29.53%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 20 HHQQTRMASEKKL--SNPMREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYELLR-RNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 430 + ++ R A +++ +N M+ K+ K+VLN+ +GE+ + A K L+ ++GQ PV +KAR ++ F +R + VT+R D+ + L+ + +VK++ L ++F G + G++EH+ I YD I+GMD V Sbjct: 14 YRERIRAAMKEQFGYTNEMQIPKLDKIVLNMGIGEAVADSKKAQTALKDLQAIAGQKPVATKARKSIAGFKLREGMVVGAKVTLRKDRMYEFLDRLVTIALPRVKDFRGLNGKSFDGRGNYAMGLKEHLVFPEINYDQIEQIWGMDIIV 162
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_BLOFL (50S ribosomal protein L5 OS=Blochmannia floridanus GN=rplE PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11 Identity = 45/138 (32.61%), Postives = 76/138 (55.07%), Query Frame = 2 Query: 47 EKKLSNPMREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFV 430 E K + M+ K+ K+ +++ VG+S L RA + LE +SGQ PV +KAR ++ SF IR+ ++I C VT+R + + E + +++++ L ++F G + GI+E I I YD GI GM+ + Sbjct: 19 EFKYKSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQGQEIGCKVTLRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEINYDTIDGIRGMNITI 156
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_ANADF (50S ribosomal protein L5 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=rplE PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.275e-11 Identity = 41/145 (28.28%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 29 QTRMASEKKLSNPMREIKVQKLVLNISVGES---GDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGL-----KVKEYE-LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVV 433 ++ + E +NPM+ K++K+V+N+ +GE+ G + + + L ++GQ PV +KAR ++ +F +R+ + I VT+RGD+ + + + +V++++ + + F G + G++E I I YD I GM+ VV Sbjct: 14 RSELMKELGFANPMQAPKLEKIVVNMGLGEAINNGKIIDASVEQLSAITGQKPVVTKARKSIANFKLRQGQSIGAMVTLRGDRMYEFFDRLVSIALPRVRDFKGVSPKAFDGKGNYTLGVREQIIFPEINYDKVEKIKGMNITVV 158 The following BLAST results are available for this feature:
BLAST of CF509681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509681 ID=CF509681; Name=CF509681; organism=Citrus sinensis; type=EST; length=453bpback to top |