CF509681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_THEVO (50S ribosomal protein L5P OS=Thermoplasma volcanium GN=rpl5p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.741e-25 Identity = 61/130 (46.92%), Postives = 85/130 (65.38%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 N M+EI + K+V+NI VG++GDRLT+AAKVLE L+G P + A+ +VR F IR+ I VT+R D A+ L L VK+Y++ +F G FGI ++ D G+KYDP GI+GMD +VL+R G Sbjct: 2 NQMQEIIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKPTQTLAKKSVRDFNIRKRLPIGVKVTLRKDDAVNFLNKALYVKDYKIPDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGMDVAIVLKRRG 131
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METM7 (50S ribosomal protein L5P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl5p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.741e-25 Identity = 63/133 (47.37%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 65 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I VT+RG A + L S K L +F G F FG+ EHID G KYDPS GIYGMD V E+ GY Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKNAEEFLGNAFSAFKTCGKVLYASSFDQVGNFSFGVPEHIDFPGQKYDPSIGIYGMDICVTFEKSGY 143
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METM6 (50S ribosomal protein L5P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl5p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.274e-25 Identity = 62/133 (46.62%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 65 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T +FGIR+ I VT+RG A + L + K L +F G F FG+ EHID G KYDPS GIYGMD V E+ GY Sbjct: 11 PMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPIGLKVTLRGKNAEEFLGNAFTAFKTSGKVLYASSFDQVGNFSFGVPEHIDFPGQKYDPSIGIYGMDVCVTFEKSGY 143
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METM5 (50S ribosomal protein L5P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 6.616e-25 Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 2 Query: 65 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 PM++ ++QK+ +N VGE+GDRLT AKV+E+L+GQ+PV + A+ T ++GIR+ I VT+RG A + L+ + K L +F G F FG+ EHID G KYDPS GIYGMD V ++ GY Sbjct: 11 PMKKPRIQKITVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAYGIRKKLPIGLKVTLRGKNAEEFLKNAFTAFKACGKVLYASSFDQVGNFSFGVPEHIDFPGQKYDPSVGIYGMDVCVTFDKAGY 143
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_PICTO (50S ribosomal protein L5P OS=Picrophilus torridus GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.129e-24 Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 N MREI + K+V+NI VG +G+RL RAAKVLE L+ P F+ A+ TVR F IR+ I VT+R D A+ L+ K+Y++ +F G FGI ++ D G+KYDP GI+GMD +V R G Sbjct: 7 NSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKGLNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIGIFGMDIAIVFRRRG 136
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METST (50S ribosomal protein L5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.129e-24 Identity = 57/131 (43.51%), Postives = 83/131 (63.36%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 N M++ + K +NI VGE G++LTRA K++E L Q PV + ++ T FGIR+ + IAC VT+RG+KA +++ L E + F G FGI+EHID+ G+KYDP GI+GMD V ++PG+ Sbjct: 2 NVMQKPFIAKATINIGVGEGGEKLTRAEKLIETLVDQKPVRTYSKVTNPEFGIRKKQPIACKVTLRGEKADKIISMVLSGLENRIKASQFDKEGNVSFGIREHIDIPGVKYDPDIGIFGMDVSVTFQKPGH 132
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METAC (50S ribosomal protein L5P OS=Methanosarcina acetivorans GN=rpl5p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.129e-24 Identity = 57/128 (44.53%), Postives = 82/128 (64.06%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 MR V+K+++++ VGESG L A +L ++GQ V A+ T+ +F I++NE I C VT+RG KA + LE+ L + E L R F G FGI+EH D G++YDP+ G++GMD VVL+RPG Sbjct: 1 MRTPIVEKVIVHMGVGESGQHLVNAEDILRNITGQEVVRCFAKRTLPAFSIKKNEPIGCKVTLRGQKAQEFLETALGIVEKTLNRSQFDSFGNVSFGIEEHTDFPGMRYDPNIGVFGMDVTVVLKRPG 128
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_SULAC (50S ribosomal protein L5P OS=Sulfolobus acidocaldarius GN=rpl5p PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24 Identity = 54/136 (39.71%), Postives = 85/136 (62.50%), Query Frame = 2 Query: 47 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 E K N MR + + K+ +NI VGESG+RL +A +++++L+G PV++K R ++R FG+R+ I T+R A++ L+ L + L + +F + G FGI EH+ + G +YDP GI+GMD + L RPGY Sbjct: 5 EAKKENVMRRVVLDKVTVNIGVGESGERLQKAYQLVQELTGVKPVYTKGRKSIREFGVRKGAPIGVKATLRRQAAVEFLKKVLPAVNFRLKQSSFDNYGNVSFGIAEHVLIPGTRYDPEIGIFGMDVAITLVRPGY 140
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_THEAC (50S ribosomal protein L5P OS=Thermoplasma acidophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.925e-24 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 NPM E+ + K+V+NI VG++GDRLT+AAKVLE L+G + A+ ++R F IR+ I VT+R AM+ L+ VK+Y++ +F G FGI ++ D G+KYDP GI+GMD +V R G Sbjct: 2 NPMEEVIIDKVVVNIGVGQAGDRLTKAAKVLEMLTGHKATNTLAKKSIRDFNIRKRLPIGVKVTLRKKDAMEFLQKAFYVKDYKITDYSFDKHGNAYFGISDYTDFKGMKYDPDIGIFGMDVAIVFRRRG 131
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_CENSY (50S ribosomal protein L5P OS=Cenarchaeum symbiosum GN=rpl5p PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.925e-24 Identity = 58/133 (43.61%), Postives = 83/133 (62.41%), Query Frame = 2 Query: 56 LSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 ++ MR+I ++K+VLN+ VG+SG+ + A + L ++SG+ P A T R FG+R+ E I VT+RG+ A L + K ++ R+F D G F FGI EHID+ GIKYDP GI G+D + L RPGY Sbjct: 1 MAGDMRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAAVTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDVCMTLSRPGY 133 The following BLAST results are available for this feature:
BLAST of CF509681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509681 ID=CF509681; Name=CF509681; organism=Citrus sinensis; type=EST; length=453bpback to top |