CF509681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_PYRAE (50S ribosomal protein L5P OS=Pyrobaculum aerophilum GN=rpl5p PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 3.284e-24 Identity = 56/130 (43.08%), Postives = 87/130 (66.92%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 +PM+ I ++K+V+NI VG SG++L +AA +L++L+G P +A+ +++ FGIR+ E I VT+R D+A+ L L+ + + +F D G FGI+EHI L G+KYDP+ GI+GMD V L +PG Sbjct: 13 HPMQRIYIEKVVVNIGVGASGEKLEKAAGLLKELTGAEPSRRRAKKSIKDFGIRKGEPIGVAVTLRRDQAVNFLMRALQAVNNRVKKTSFDDRGNVCFGIKEHILLPGVKYDPAVGIWGMDVCVKLAKPG 142
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METB6 (50S ribosomal protein L5P OS=Methanoregula boonei (strain 6A8) GN=rpl5p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 7.315e-24 Identity = 52/128 (40.62%), Postives = 81/128 (63.28%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 MR++ + K+V+++ VGESG++L +A +++ ++ QTP+ S A+ T +F IR+ I C VT+RG A +++ L + + F +G F FGI+EH D G+ YDP GI+GMD VVLER G Sbjct: 1 MRDVHIDKVVVHMGVGESGEKLVKAENIMKTITKQTPIRSVAKMTQPAFNIRKGAPIGCKVTLRGKPAEDFIKTSLNIVNKTIFESQFDKSGNFSFGIEEHTDFPGMSYDPQIGIFGMDINVVLERNG 128
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METMJ (50S ribosomal protein L5P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl5p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.248e-23 Identity = 56/128 (43.75%), Postives = 83/128 (64.84%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 M++I + K+V+++ VGESG+RL +A +++Q++GQ PV + A+ T +FGIR+ I C VT+R + A + + + L + E L F TG FGI+EH D G+ YDP+ GIYGMD VVLE G Sbjct: 4 MKDIYIDKVVVHMGVGESGERLVKAEDLVKQITGQKPVRTIAKRTQPAFGIRKGAPIGCKVTLRRENAEKFITTALDIIERRLAPSQFDRTGNVSFGIEEHTDFPGMSYDPTIGIYGMDVNVVLEYKG 131
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_METLZ (50S ribosomal protein L5P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl5p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.248e-23 Identity = 60/126 (47.62%), Postives = 78/126 (61.90%), Query Frame = 2 Query: 83 VQKLVLNISVGESGDRLTRAAKVLEQLS-GQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYE--LLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPG 448 V K+V+++ VGE+G+RL A ++ L+ G P+ S AR T+ +FGIR+ + I C T+RG KAM LE LK E L R F TG FGFGI+EH D G YDP GIYGMD V+E+ G Sbjct: 9 VAKVVVHMGVGEAGERLVNAENIMADLTKGAKPIRSYARNTLPAFGIRKGQPIGCKATLRGKKAMDFLEMALKTYAVENVLHTRQFDATGNFGFGIEEHTDFPGQAYDPKIGIYGMDIIAVIEKKG 134
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_META3 (50S ribosomal protein L5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl5p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.780e-23 Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 2 Query: 65 PMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLE---SGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 PM + +++K+ +N+ VGESGD+L A KV+ +++GQ PV + A+ T +F IR+ I +T+RG KA + L+ + +L +F G F FGI EHID KYDPS GIYGMD V E+PGY Sbjct: 11 PMSKPRIEKVTVNMGVGESGDKLLTAEKVVSEITGQKPVRTLAKQTNPAFNIRKKLPIGLKITLRGKKAEEFLKDAFTAFTASGKQLFTYSFDKRGNFSFGIPEHIDFPNQKYDPSVGIYGMDICVTFEKPGY 143
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_CALMQ (50S ribosomal protein L5P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl5p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 8.088e-23 Identity = 54/131 (41.22%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 62 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 +PMR I + + +N+ +G+SG+RL +AAKV+ +L+G+TP + A +++ FGIRR E I VT+R ++A+ L L ++ L +F + G FGI+EHI + G +YDP+ GI+G D V L RPG+ Sbjct: 30 HPMRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLLVTLRRNEAVWFLLRALAAVDFTLREESF-NAGNVSFGIREHILVPGSRYDPALGIFGFDVAVTLARPGF 159
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_HALMA (50S ribosomal protein L5P OS=Haloarcula marismortui GN=rpl5p PE=1 SV=4) HSP 1 Score: 102.834 bits (255), Expect = 6.847e-22 Identity = 54/129 (41.86%), Postives = 80/129 (62.02%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 MRE +++K+V+++ +G G L A +L +++GQ PV +KA+ TV F IR + I VT+R + A + L++ L + EL F DTG F FG++EH + +YDPS GIYG+D V L RPGY Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAKVTLRDEMAEEFLQTALPLA--ELATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDVTVNLVRPGY 140
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_HALSA (50S ribosomal protein L5P OS=Halobacterium salinarium GN=rpl5p PE=1 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 8.942e-22 Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 MRE +++K+V+++ VG+ G L A +LE ++GQ V +KA+ FG+R+ + I VT+R D A+ LE L + + RR F +TG FGI+EH D +YDP+ GIYGMD V L RPGY Sbjct: 12 MREPRIEKVVVHMGVGQGGVELQNAETILEAITGQQTVRTKAKSPEPEFGLRQGDPIGAKVTLRDDTAVDFLERALPAADLD--RRQFDNTGNVSFGIEEHTDFPSQEYDPNIGIYGMDVTVNLTRPGY 138
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_HALS3 (50S ribosomal protein L5P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl5p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 8.942e-22 Identity = 55/129 (42.64%), Postives = 79/129 (61.24%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 MRE +++K+V+++ VG+ G L A +LE ++GQ V +KA+ FG+R+ + I VT+R D A+ LE L + + RR F +TG FGI+EH D +YDP+ GIYGMD V L RPGY Sbjct: 12 MREPRIEKVVVHMGVGQGGVELQNAETILEAITGQQTVRTKAKSPEPEFGLRQGDPIGAKVTLRDDTAVDFLERALPAADLD--RRQFDNTGNVSFGIEEHTDFPSQEYDPNIGIYGMDVTVNLTRPGY 138
BLAST of CF509681 vs. ExPASy Swiss-Prot
Match: RL5_NATPD (50S ribosomal protein L5P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl5p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.992e-21 Identity = 51/129 (39.53%), Postives = 82/129 (63.57%), Query Frame = 2 Query: 68 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL-GIKYDPSTGIYGMDFFVVLERPGY 451 MRE V+K+V+++ VG G+ L +A ++LE++ Q PV + A+ T++ F +R + I T+RG+ A + LE+ L + + + R+ F +TG F FG++EH + +YDP GIYG+D V L RPGY Sbjct: 13 MREPTVEKVVVHMGVGRGGEPLAQAEEILEEIVEQQPVRTTAQKTIQDFEVREGDPIGTKATLRGEDAEEFLETALPLADID--RKQFDETGNFSFGVEEHTEFPSQEYDPQIGIYGLDVTVNLVRPGY 139 The following BLAST results are available for this feature:
BLAST of CF509681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509681 ID=CF509681; Name=CF509681; organism=Citrus sinensis; type=EST; length=453bpback to top |