CF509722

Overview
NameCF509722
Unique NameCF509722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL_SCHMA (Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23
Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 1
Query:   49 VKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKV-GLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +K+ K Y+   E E RF IFK N+     +    R   + G+  ++DLT +E+   +L A +    +   +  S   L +    +P + DWR+KGAV EVK+QG CGSCWAFST   VE      TG L+SLSEQ+LVDCD   ++GCNGGL   A+E
Sbjct:   25 LKYRKQYHET-EDEIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTDEFARTHLTASWVVPSSRSNTPTS---LGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVESQWFRKTGKLLSLSEQQLVDCD-GLDDGCNGGLPSNAYE 177          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 5.216e-23
Identity = 65/165 (39.39%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   43 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLG-ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDC-DTSYNEGCNGGLMDYAFE 519
            W  KHGK YN   E+ KR  +++ N + I+ HN E       + + +N F DLTN E+  M  G  R   K+T +       Y+P+        VDWR+ G V  VK+QG C S WAFS   ++EG     T  LI LSEQ L+DC  ++   GC+GG M YAF+
Sbjct:   32 WRTKHGKTYNMNEERLKR-AVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPK-------RVDWRQLGYVTPVKNQGHCASSWAFSATGSLEGQMFRKTERLIPLSEQNLLDCMGSNVTHGCSGGFMQYAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22
Identity = 64/172 (37.21%), Postives = 92/172 (53.49%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTS--LKSKRSDRYLPRVG---EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            ++ W +K+ K Y+   E  KR  ++++N++ I+ HN EN     TY + +N FAD+T+EE++ M +G +     T   L  +    + P      +ALP  VDWR +G V  V+ QG C SCWAF    A+EG     TG LI LS Q L+DC     N GC  G    AF+
Sbjct:   29 WQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGSFFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQ 199          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.518e-22
Identity = 62/174 (35.63%), Postives = 92/174 (52.87%), Query Frame = 1
Query:   13 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFE 519
            D ++   ++ W  K+ K+Y+   E  +R  ++++N+R I  HN EN      + + +N+F D T+EE+R         A  T   ++        V   LPD  DWR++G V  V++QG CGSCWAF+   A+EG     TG+L  LS Q L+DC  T  N+GC  G    AFE
Sbjct:   22 DPKLDAEWKDWKTKYAKSYSPKEEALRR-AVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSIDNIPIPAAMTDPHAQN------HVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFE 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.518e-22
Identity = 65/157 (41.40%), Postives = 87/157 (55.41%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEH-NSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEG-INKIVTGSLISLSEQELVDCDTSYNEGCNGG 498
            F+ W   H K +    E   RF +F DN +F++ + N+E       LN FAD+T+EE+   +LG  +    T+   K + +       A P+SVDWR    +   KDQG CGSCW F T A +EG +NK + G L S SEQ+LVDCD S N GC GG
Sbjct:   18 FKQWAATHNKVFANRAEYLYRFAVFLDNKKFVEANANTE-------LNVFADMTHEEFIQTHLGMTYEVPETTSNVKAAVK-------AAPESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDL-GKLYSFSEQQLVDCDASDN-GCEGG 156          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.589e-22
Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            FE +  +  K Y +  EK +RF+IF+ NL  I   N +N + K  +N+F+DL+ +E  + Y G     +  +          P  G   P   DWR+   V  VK+QG CG+CWAF+T+A++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE
Sbjct:   28 FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKN-QNDSAKYEINKFSDLSKDETIAKYTGLSLPIQTQNFCKVIVLDQPPGKG---PLEFDWRRLNKVTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCD-FVDAGCNGGLLHTAFE 184          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.381e-22
Identity = 59/173 (34.10%), Postives = 93/173 (53.76%), Query Frame = 1
Query:   16 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGA---RFGAKRTSLKSKRSDRYLPRVGEAL--PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            D     +E +  +H K Y    +++  F  FK NL  ++  N+ +     G+N+F+D+    + + + G       +  ++    R   Y+   G +   P+S DWRK   V +VK+QG CGSCWAF+ I  +E    I+  SLI LSEQ+L+DCD   ++GC+GGLM  AF+
Sbjct:   27 DSASVYYENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDIDKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCD-RVDQGCDGGLMHLAFQ 198          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.381e-22
Identity = 64/175 (36.57%), Postives = 91/175 (52.00%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN------------RTYKVGLNRFADLTNEEYRSMYLGARFG-AKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            F+ +  ++ K+Y+   E + R+ +FKDNL  I+  N EN             + + G+N+F+D T +E      G     ++  +L   R  +  P +   LPD  DWR    V  +KDQG CGSCWAF  I  +E    I    LI LSEQ+L+DCD   + GCNGGLM  AF+
Sbjct:   57 FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDI--RLPDYYDWRDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD-EVDLGCNGGLMHLAFQ 228          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22
Identity = 59/162 (36.42%), Postives = 85/162 (52.47%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            FE +  ++ K Y +  EK+ R+ IF+ N+  I++ NS N +    +NRFAD+   E    + G   G     L    +           P S DWR    +  VKDQG CG+CW F+++ A+E    I    LI LSEQ+LVDCD   + GC+GGL+  A+E
Sbjct:   40 FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIRHTGLASG--ELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCD-FVDMGCDGGLIHTAYE 198          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22
Identity = 61/162 (37.65%), Postives = 91/162 (56.17%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            FE +  +  K Y++  EK +RF+IF+ NL  I   N +N + K  +N+F+DL+ +E  + Y G     +  +          P  G   P   DWR+   V  VK+QG CG+CWAF+T+ ++E    I    LI+LSEQ+++DCD   + GCNGGL+  AFE
Sbjct:   28 FEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKN-QNDSAKYEINKFSDLSKDETIAKYTGLSLPTQTQNFCKVILLDQPPGKG---PLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCD-FVDAGCNGGLLHTAFE 184          
The following BLAST results are available for this feature:
BLAST of CF509722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL_SCHMA3.994e-2341.77Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=... [more]
TEST2_RAT5.216e-2339.39Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATQ_RAT1.162e-2237.21Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATJ_MOUSE1.518e-2235.63Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
ACP1_ENTHI1.518e-2241.40Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CATV_NPVAC2.589e-2238.27Viral cathepsin OS=Autographa californica nuclear ... [more]
CATV_NPVST3.381e-2234.10Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATV_NPVHZ3.381e-2236.57Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CATV_NPVSE4.416e-2236.42Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_NPVBM4.416e-2237.65Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-230 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509722 ID=CF509722; Name=CF509722; organism=Citrus sinensis; type=EST; length=519bp
AGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTTGT
GAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTG
AGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAAC
CGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGA
GTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCT
TGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTG
CCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGA
TCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAG
AGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAG
GAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTT
GATGGACTATGCATTCGAG
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