CF509722

Overview
NameCF509722
Unique NameCF509722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP4_CARCN (Cysteine proteinase 4 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.389e-14
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 1
Query:  301 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 426
            P+S+DWRKKGAV  VK+QGSCGSCWAFSTI  VEGINKI TG
Sbjct:    2 PESIDWRKKGAVTPVKNQGSCGSCWAFSTIVTVEGINKIRTG 43          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP2_CARCN (Cysteine proteinase 2 (Fragment) OS=Carica candamarcensis PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 1
Query:  301 PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG 426
            P SVDWR+KGAV  VKDQ  CGSCWAFST+A VEGINKIVTG
Sbjct:    2 PGSVDWRQKGAVTPVKDQNPCGSCWAFSTVATVEGINKIVTG 43          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 8.347e-13
Identity = 47/164 (28.66%), Postives = 77/164 (46.95%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            FE +     K Y  + E+E   + F ++L++++ +       K  +N  +DL+ +E+++ YL     F   +T                 +P  +D R    V  ++ QG CGSCWAFS +AA E        + + LSEQELVDC + +  GC+G  +    E
Sbjct:   26 FEEFKKAFNKNYATVEEEEVARKNFLESLKYVEAN-------KGAINHLSDLSLDEFKNRYLMSAEAFEQLKTQFDLNAETSACRINSVNVPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDCASQH--GCHGDTIPRGIE 180          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: PEPT1_DERPT (Peptidase 1 OS=Dermatophagoides pteronyssinus GN=DERP1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 9.229e-12
Identity = 44/164 (26.83%), Postives = 76/164 (46.34%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            FE +     K+Y    ++E   + F ++++++  +          +N  +DL+ +E+++ +L     F   +T              G A P  +D R+   V  ++ QG CGSCWAFS +AA E          + L+EQELVDC + +  GC+G  +    E
Sbjct:   26 FEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGG-------AINHLSDLSLDEFKNRFLMSAEAFEHLKTQFDLNAETNACSINGNA-PAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNQSLDLAEQELVDCASQH--GCHGDTIPRGIE 179          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.056e-11
Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = 1
Query:  169 LNRFADLTNEEYRSMYLGA--RFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNG 495
            +N+F+D++ EE+++ YL +   + A +         +        +P+ +D R  G V ++K+Q +CGSCWAFS +A VE          + LSEQELVDC + +  GC G
Sbjct:   65 INQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVNIPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDCASQH--GCGG 173          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: PEPT1_EURMA (Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.685e-11
Identity = 44/164 (26.83%), Postives = 75/164 (45.73%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYL--GARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            FE +     K Y    ++E   + F ++L++++ +       K  +N  +DL+ +E+++ +L     F   +T                +LP  +D R    V  ++ QG CGSCWAFS +A+ E          + L+EQELVDC  +   GC+G  +    E
Sbjct:   26 FEEFKKAFNKTYATPEKEEVARKNFLESLKYVESN-------KGAINHLSDLSLDEFKNQFLMNANAFEQLKTQFDLNAETYACSINSVSLPSELDLRSLRTVTPIRMQGGCGSCWAFSGVASTESAYLAYRNMSLDLAEQELVDC--ASQNGCHGDTIPRGIE 180          
The following BLAST results are available for this feature:
BLAST of CF509722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP4_CARCN3.389e-1480.95Cysteine proteinase 4 (Fragment) OS=Carica candama... [more]
CYSP2_CARCN5.780e-1480.95Cysteine proteinase 2 (Fragment) OS=Carica candama... [more]
PEPT1_DERFA8.347e-1328.66Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
PEPT1_DERPT9.229e-1226.83Peptidase 1 OS=Dermatophagoides pteronyssinus GN=D... [more]
PEPT1_PSOOV2.056e-1134.23Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
PEPT1_EURMA2.685e-1126.83Peptidase 1 OS=Euroglyphus maynei GN=EURM1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-230 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509722 ID=CF509722; Name=CF509722; organism=Citrus sinensis; type=EST; length=519bp
AGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTTGT
GAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTG
AGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAAC
CGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGA
GTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCT
TGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTG
CCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGA
TCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAG
AGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAG
GAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTT
GATGGACTATGCATTCGAG
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