CF509722

Overview
NameCF509722
Unique NameCF509722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.159e-30
Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFE 519
            F  + V++GK+Y +  E  +RF IF ++L  +   N +   Y++G+NRF+D++ EE+++  LGA      T      +  +L R   ALP++ DWR+ G V+ VK+Q  CGSCW FST  A+E      TG  ISLSEQ+LVDC   +N  GCNGGL   AFE
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-----AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFE 218          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.514e-30
Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            F  W   H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ YLG  F    ++L     ++    +      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE
Sbjct:   30 FTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDG--SALIGTEEEK----IFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFE 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.514e-30
Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1
Query:   16 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMY-LGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            D+V  +F  + V+ G+ Y +  E++ R  IF+ NL+ I+E N+ E  + K G+  FAD+T+ EY+    L  R  AK T      S   +P     LP   DWR+K AV +VK+QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++
Sbjct:  302 DKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGLWQRDEAKATG----GSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYK 466          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.583e-30
Identity = 74/164 (45.12%), Postives = 98/164 (59.76%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            F++W V+H K Y++  E   R + F  NLR I+ HN+ N T+K+GLN+F+D++ +E +  YL +          S     YL   G   P S+DWRKKG  V  VK+QGSCGSCW FST  A+E    I TG L  L+EQ+LVDC  ++ N GC GGL   AFE
Sbjct:   35 FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDELKRKYLWSE-----PQNCSATKSNYLRGTGP-YPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFNNHGCQGGLPSQAFE 191          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 4.405e-30
Identity = 70/168 (41.67%), Postives = 100/168 (59.52%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY--NEGCNGGLMDYAFE 519
            ++ W   +GK Y    E+  R  I++ NL+ +  HN E+     +Y++G+N   D+T+EE  S+       + R   +  R+  Y     + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVDC T+   N+GCNGG M  AF+
Sbjct:   28 WDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-----MSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQ 190          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL1_MOUSE (Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 7.515e-30
Identity = 73/174 (41.95%), Postives = 97/174 (55.75%), Query Frame = 1
Query:   13 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            D      +  W   H + Y    E+E R  I++ N+R I  HN E       + + +N F D+TNEE+R +  G R        K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC  +  N+GCNGGLMD+AF+
Sbjct:   22 DQTFSAEWHQWKSTHRRLYGT-NEEEWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQ------KHKKGRLFQEPLMLKIPKSVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHAQGNQGCNGGLMDFAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 9.814e-30
Identity = 75/177 (42.37%), Postives = 101/177 (57.06%), Query Frame = 1
Query:   16 DEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS----ENRTYKVGLNRFADLTNEEYRSMYLG-----ARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAF 516
            D +   +  + ++H K Y    E+  R +IF +N   I +HN        +YK+GLN++AD+ + E++    G      +   +RT L       Y+P     +P SVDWR+ GAV  VKDQG CGSCWAFS+  A+EG +    G L+SLSEQ LVDC T Y N GCNGGLMD AF
Sbjct:   22 DLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGAT---YIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLMDNAF 195          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.282e-29
Identity = 73/174 (41.95%), Postives = 96/174 (55.17%), Query Frame = 1
Query:   13 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            D      +  W   H + Y    E+E R  +++ N+R I  HN E    K G    +N F D+TNEE+R +  G R        K K+   +   +   +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF+
Sbjct:   22 DQTFNAQWHQWKSTHRRLYGT-NEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQ------KHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.282e-29
Identity = 73/164 (44.51%), Postives = 101/164 (61.59%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNE-GCNGGLMDYAFE 519
            F  +  ++GK Y ++ E + RF +FK+NL  I   N +  +YK+ LN+FADLT +E++   LGA   A+  S   K S +    + EA +PD+ DWR+ G V+ VK+QG CGSCW FST  A+E       G  ISLSEQ+LVDC  ++N  GC+GGL   AFE
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGA---AQNCSATLKGSHK----ITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFNNFGCHGGLPSQAFE 215          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 2.856e-29
Identity = 71/174 (40.80%), Postives = 100/174 (57.47%), Query Frame = 1
Query:   13 DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFE 519
            D  +   +  W   H + Y  + E+  R  +++ N++ I+ HN E R    ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+
Sbjct:   22 DHSLEAQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQ 188          
The following BLAST results are available for this feature:
BLAST of CF509722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
ALEU_HORVU1.159e-3042.33Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP4_DICDI1.514e-3042.17Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CPR1_DROME1.514e-3043.53Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATH_BOVIN2.583e-3045.12Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATS_BOVIN4.405e-3041.67Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_MOUSE7.515e-3041.95Cathepsin L1 OS=Mus musculus GN=Ctsl1 PE=1 SV=2[more]
CATL_SARPE9.814e-3042.37Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATL1_RAT1.282e-2941.95Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
ALEUL_ARATH1.282e-2944.51Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATL1_HUMAN2.856e-2940.80Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-230 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509722 ID=CF509722; Name=CF509722; organism=Citrus sinensis; type=EST; length=519bp
AGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTTGT
GAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTG
AGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAAC
CGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGA
GTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCT
TGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTG
CCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGA
TCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAG
AGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAG
GAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTT
GATGGACTATGCATTCGAG
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