CF509722

Overview
NameCF509722
Unique NameCF509722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.559e-27
Identity = 71/156 (45.51%), Postives = 94/156 (60.26%), Query Frame = 1
Query:   52 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN--RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 513
            +HGKA+    E+  RF  FK N++     N++N    Y V   +FADLT +E+  +YL   + A+   LK+ + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A
Sbjct:   48 RHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVS-GKFADLTPQEFAKLYLNPDYYARH--LKNHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQA 199          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.559e-27
Identity = 68/166 (40.96%), Postives = 93/166 (56.02%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +E W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +    R+         Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSH---SNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQ 187          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.954e-27
Identity = 69/163 (42.33%), Postives = 97/163 (59.51%), Query Frame = 1
Query:   52 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFE 519
            K+G+ Y    E   R  IF+ N ++I+E N +      T+ + +N+F D+T EE+ ++  G          +S     + P+  E  P +  VDWR KGAV  VKDQG CGSCWAFST  ++EG + + TGSLISL+EQ+LVDC   Y  +GCNGG M+ AF+
Sbjct:   26 KYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAVMKG------NIPRRSAPVSVFYPKK-ETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGSLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFD 181          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 5.954e-27
Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = 1
Query:   52 KHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN--RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYA 513
            +HGKA+    E+  RF  FK N++     N++N    Y V   +FADLT +E+  +YL   + A+   LK  + D ++     +   SVDWR KGAV  VK+QG CGSCWAFS I  +EG       SL+SLSEQ LV CD + +EGCNGGLMD A
Sbjct:   48 RHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVS-GKFADLTPQEFAKLYLNPDYYARH--LKDHKEDVHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD-NIDEGCNGGLMDQA 199          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 69/167 (41.32%), Postives = 96/167 (57.49%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +E W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+
Sbjct:   27 WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 69/167 (41.32%), Postives = 96/167 (57.49%), Query Frame = 1
Query:   34 FEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            ++ W   + K YN+  ++  R  I++ NL+ I  HN E      TY++ +N   D+T+EE      G +         S+ +D  Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSH----SRSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.326e-26
Identity = 69/168 (41.07%), Postives = 93/168 (55.36%), Query Frame = 1
Query:   31 MFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRV--GEA---LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            +F  + VK+ K Y    EKE RFEIFK NL  I+  N+   +    +N  AD+++ E      G +    R     K++    P V  G++   +PDS DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE
Sbjct:   42 LFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSLMRGE---KKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFE 205          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.326e-26
Identity = 73/164 (44.51%), Postives = 91/164 (55.49%), Query Frame = 1
Query:   43 WFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            W   H + Y A  E+  R  +++ N++ I+ HN E    K G    +N F D+TNEE+R M +G     K    K  R   +L      LP SVDWRKKG V  VK+Q  CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGG M  AF+
Sbjct:   32 WKATHRRLYGA-NEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQM-MGCFRNQKFRKGKVFREPLFLD-----LPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQ 188          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 2.955e-26
Identity = 67/172 (38.95%), Postives = 99/172 (57.56%), Query Frame = 1
Query:   19 EVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFID--EHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDW--RKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFE 519
            +   ++  W +K+ + Y +  ++  RF++F DNL +I   + ++E+ TY + LN+FAD++ +E+ S YL  R    +T+  +  +  +  +  E     VDW   KK     VK+QGSCGSCWAFS + A+E    I       LSEQ+LVDC   Y NEGCNGG MD AFE
Sbjct:   21 DTANLYANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSLR--VPKTAKLNASNANFQYKGAE-----VDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNEGCNGGWMDSAFE 185          
BLAST of CF509722 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.859e-26
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    1 SWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFE 519
            S   ++ +   F  +  KHG+ Y +  E+  R  +F++NL     H + N     G+  F+DLT EE+RS Y     GA   +   +R+   +       P +VDWR +GAV  VKDQG CGSCWAFS I  VE    +    L +LSEQ LV CD + + GC+GGLM+ AFE
Sbjct:   27 SLHAEETLTSQFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRSRYHN---GAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKT-DSGCSGGLMNNAFE 195          
The following BLAST results are available for this feature:
BLAST of CF509722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
LMCPA_LEIME4.559e-2745.51Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CATK_RABIT4.559e-2740.96Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CYSP2_HOMAM5.954e-2742.33Digestive cysteine proteinase 2 OS=Homarus america... [more]
CYSP1_LEIPI5.954e-2745.51Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATK_PIG7.776e-2741.32Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_CANFA7.776e-2741.32Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CATV_GVXN1.326e-2641.07Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATL2_HUMAN1.326e-2644.51Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATL2_PARTE2.955e-2638.95Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSP_TRYCR3.859e-2639.31Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-230 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-80_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509722 ID=CF509722; Name=CF509722; organism=Citrus sinensis; type=EST; length=519bp
AGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTTGT
GAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTTG
AGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAAC
CGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGGA
GTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCT
TGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTTG
CCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGA
TCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTAG
AGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCAG
GAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTTT
GATGGACTATGCATTCGAG
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