CF509756

Overview
NameCF509756
Unique NameCF509756
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length636
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11237 contig Csv1_Contig11237:177..812. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11
Identity = 46/145 (31.72%), Postives = 74/145 (51.03%), Query Frame = 2
Query:  194 ISGTLGPELGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFP-MESFENNKLNGPELQGLVPYDFGC*RRVKTLRL 625
            + G++  +L  L++L  L L  N ++G +P  LGNL  +  M    N L G IPK    L  L+ L +++N  +GSIP E+   + L+   + ++GL G +PV     SF  +   E   +   EL G +P   G   ++ TLR+
Sbjct:  110 VVGSIPQQLWTLEYLTNLNLGQNVLTGSLPPALGNLTRMRWMTFGINALSGPIPKEIGLLTDLRLLSISSNNFSGSIPDEIGRCTKLQQIYIDSSGLSGGLPV-----SFANLVELEQAWIADMELTGQIPDFIGDWTKLTTLRI 249          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.410e-11
Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 2
Query:   11 ISPALSTNSEGNALHALRSRFKDPTNVLQSWDPTLVNPC--TWFHVTCDSNNHVIRLDLGNSNISGTLGPELGQLQHL----------------------QYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV--DGPFRSFPMESFENNKLNGP 562
            +S AL+   +  A+++L    + P  +L  W  +  +PC  +W  V C+++  V  + L ++N+ G LG  L     L                      Q L L  N+ +G IP+ L +LKSL  M +  N L G+IP  F +L  +  + +++N L+G +P  +  LS L    + NN L G + V  D P +     + ENN  NGP
Sbjct:   28 LSLALTNPDDVAAINSLFLALESP--LLPGWVASGGDPCGESWQGVLCNASQ-VETIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGELDVLQDLPLKDL---NVENNLFNGP 231          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.841e-11
Identity = 50/168 (29.76%), Postives = 82/168 (48.81%), Query Frame = 2
Query:   98 SWDPTLVNPCTWFHVTCDSNN---HVIRLDLGNSNISGTLGPE-LGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIP-KSFANL-KSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQGLVP 583
            +W+  L    +W  +TCD +N    V+ + L    + G++ P  LG+L  L+ L L  N + G +P ++ +L SL  + +  N   GE+   S  ++ K L  L ++ N L+G+IP  L  LS + V  + NN        DGP  S  + S +   L+   L G +P
Sbjct:   50 NWNKNLSLCSSWIGITCDESNPTSRVVAVRLPGVGLYGSIPPATLGKLDALKVLSLRSNSLFGTLPSDILSLPSLEYLYLQHNNFSGELTTNSLPSISKQLVVLDLSYNSLSGNIPSGLRNLSQITVLYLQNNSF------DGPIDSLDLPSVKVVNLSYNNLSGPIP 211          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = 2
Query:  110 TLVNPCTWFHVT-CDSNNHVIRLDLGNSNISGT------------------------LGPELGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPM 529
            T  + C+W  V  CDS+ +V+ +     ++SG+                        L  +L  L  L+ L L  N IS  +P  +GN  SL ++D+  N + G+IP + +NL +L  L+++NN     +P EL     L   D+S+N L  ++PV G   +FP+
Sbjct:   48 TFSSLCSWPGVVVCDSSENVLHISASGLDLSGSIPDNTIGKMSKLQTLDLSGNKITSLPSDLWSLSLLESLNLSSNRISEPLPSNIGNFMSLHTLDLSFNSISGKIPAAISNLVNLTTLKLHNNDFQFGVPPELVHCRSLLSIDLSSNRLNESLPV-GFGSAFPL 211          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 2
Query:  245 LELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 499
            L+L  + ++GKI  ++ NL  L  +D+  NKL G +P+  AN+KSL F+ ++NN L GSIP+ L    +LK+    N  LC T P
Sbjct:  419 LDLSSHKLTGKIVPDIQNLTQLQKLDLSNNKLTGGVPEFLANMKSLLFINLSNNNLVGSIPQALLDRKNLKLEFEGNPKLCATGP 503          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y5720_ARATH (Probable inactive receptor kinase At5g67200 OS=Arabidopsis thaliana GN=At5g67200 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.102e-11
Identity = 50/164 (30.49%), Postives = 72/164 (43.90%), Query Frame = 2
Query:  125 CTWFHVTCDSNNHVIRLDLGNSNISGTLGPE-LGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTL----------------------SDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENN 547
            C W  V C +   ++RL L    + G      L +L  L+ L L  N + G IP +L +L +L S+ + +N+  G  P S  +L  L  L +++N  +GSIP E+  L                      S L  F+VS N L G IPV      F   SF +N
Sbjct:   62 CQWRGVKC-AQGRIVRLVLSGVGLRGYFSSATLSRLDQLRVLSLENNSLFGPIP-DLSHLVNLKSLFLSRNQFSGAFPPSILSLHRLMILSISHNNFSGSIPSEINALDRLTSLNLDFNRFNGTLPSLNQSFLTSFNVSGNNLTGVIPVTPTLSRFDASSFRSN 223          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y2278_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g02780 OS=Arabidopsis thaliana GN=At2g02780 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11
Identity = 42/118 (35.59%), Postives = 64/118 (54.24%), Query Frame = 2
Query:  173 LDLGNSNISGTLGPELGQL-QHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSF 523
            LDLG +     LGPE+  L   L  + L  N    KIP+++  L +L S+D+  N+  G IP+   ++ SL+ L ++ N L+GS+P    T S +   DVS+N L G +P     +SF
Sbjct:  184 LDLGGNK----LGPEVPSLPSKLTTVSLKNNSFRSKIPEQIKKLNNLQSLDLSSNEFTGSIPEFLFSIPSLQILSLDQNLLSGSLPNSSCTSSKIITLDVSHNLLTGKLPSCYSSKSF 297          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11
Identity = 57/202 (28.22%), Postives = 89/202 (44.06%), Query Frame = 2
Query:   35 SEGNALHALRSRFKDPTNVLQSWDPTLVNPC--TWFHVTCDSNNHVIRLDLGNSNISGTLGPE-LGQLQHLQYLELYMNDISGKIPKE----------------------LGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFE--NNKLNG 559
            S+ +AL+ L S    P  + Q W     +PC   W  VTC S + V ++ L    +SGTLG   L +L  L  L+L  N++ G +P +                      L  +  L  +++  N+ +G+I   F+ L SL  L  + N  T S+P   ++L+ LK   + NN   GT+ V       P+E+    NN   G
Sbjct:   30 SDTSALNTLFSGMHSPAQLTQ-WTAAAGDPCGQNWRGVTC-SGSRVTQIKLSGLELSGTLGGYMLDKLTSLTELDLSSNNLGGDLPYQFPPNLQRLNLANNQFTGAASYSLSQITPLKYLNLGHNQFKGQIAIDFSKLDSLTTLDFSFNSFTNSLPATFSSLTSLKSLYLQNNQFSGTVDV---LAGLPLETLNIANNDFTG 226          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 2
Query:  191 NISGTLGPELGQLQHLQYLELYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPV 502
            ++ G + PEL  L +L  L L  N ++G +P  +GNL  +  M    N L G +PK    L  L+ L +++N  +GSIP E+   + L+   + ++GL G IP+
Sbjct:  110 DVVGPIPPELWTLTYLTNLNLGQNVLTGSLPPAIGNLTRMQWMTFGINALSGPVPKEIGLLTDLRLLGISSNNFSGSIPDEIGRCTKLQQMYIDSSGLSGRIPL 213          
BLAST of CF509756 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.139e-11
Identity = 55/163 (33.74%), Postives = 73/163 (44.79%), Query Frame = 2
Query:   86 NVLQSWDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISGTLGPE-LGQLQHLQYLELYMNDISGKIP--KELGNLKSLV----------------------SMDMYQNKLEGEIPKSFANLKSLKFLRVNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 499
            N L SW+     PCTW  V C+  + V RL + N  +SG++  E L  L  L+ L    N   G  P  K+L  LKSL                        + + QNK  G+IP S A L  L  LR++ N+ TG IP        L + ++SNN L G IP
Sbjct:   51 NALASWNAKSP-PCTWSGVLCNGGS-VWRLQMENLELSGSIDIEALSGLTSLRTLSFMNNKFEGPFPDFKKLAALKSLYLSNNQFGGDIPGDAFEGMGWLKKVHLAQNKFTGQIPSSVAKLPKLLELRLDGNQFTGEIPE---FEHQLHLLNLSNNALTGPIP 208          
The following BLAST results are available for this feature:
BLAST of CF509756 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
Y5614_ARATH1.410e-1131.72Probable LRR receptor-like serine/threonine-protei... [more]
SRF1_ARATH1.410e-1129.05Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
Y5516_ARATH1.841e-1129.76Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
Y5815_ARATH3.141e-1129.09Probably inactive leucine-rich repeat receptor-lik... [more]
Y5169_ARATH3.141e-1141.18Probable LRR receptor-like serine/threonine-protei... [more]
Y5720_ARATH4.102e-1130.49Probable inactive receptor kinase At5g67200 OS=Ara... [more]
Y2278_ARATH5.358e-1135.59Probable LRR receptor-like serine/threonine-protei... [more]
SRF6_ARATH5.358e-1128.22Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
Y1561_ARATH6.997e-1133.65Probable LRR receptor-like serine/threonine-protei... [more]
RLK_ARATH9.139e-1133.74Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-264 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509756 ID=CF509756; Name=CF509756; organism=Citrus sinensis; type=EST; length=636bp
CTTCCTCTTCATTTCACCTGCCCTCTCAACAAACTCTGAAGGAAATGCTT
TGCATGCCTTGAGAAGCAGGTTTAAGGACCCCACAAATGTGTTGCAGAGC
TGGGACCCAACGCTGGTTAATCCCTGCACTTGGTTCCATGTCACCTGTGA
TTCCAACAATCATGTGATTCGCTTGGACTTGGGTAACTCTAATATTTCTG
GAACTTTGGGGCCTGAGCTTGGCCAGCTCCAGCATCTGCAGTACTTGGAG
CTTTACATGAATGACATAAGTGGGAAAATTCCGAAAGAGTTAGGTAATTT
GAAAAGCCTTGTCAGCATGGATATGTATCAGAATAAACTGGAAGGAGAAA
TACCAAAGTCCTTCGCCAATTTGAAGTCACTTAAATTTCTGCGGGTGAAC
AACAACAAACTAACAGGATCAATTCCGAGGGAACTAACCACCCTGTCGGA
CCTCAAAGTTTTTGATGTTTCTAACAATGGTCTCTGTGGGACAATCCCTG
TTGATGGTCCTTTTAGAAGCTTTCCTATGGAGAGTTTTGAAAATAATAAA
CTCAATGGACCAGAGCTGCAAGGACTGGTGCCTTATGATTTTGGATGCTG
AAGAAGGGTGAAAACCCTCCGTCTTCCATTGAAGAC
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