CF509782

Overview
NameCF509782
Unique NameCF509782
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length271
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.171e-42
Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS IRVGSYNGEEIYAPFKS+LPMVNPDD+VFGGWDIS MNLADAM RA+V DIDLQKQLRPYMESM PLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASTIRVGSYNGEEIYAPFKSLLPMVNPDDLVFGGWDISSMNLADAMTRAKVLDIDLQKQLRPYMESMCPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.836e-42
Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNPDD+VFGGWDIS+MNLADAM RA+V DIDLQKQLRPYME MVPLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPDDVVFGGWDISNMNLADAMGRAKVLDIDLQKQLRPYMEHMVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.704e-42
Identity = 80/89 (89.89%), Postives = 87/89 (97.75%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQ+S+IRVGS+NGEEIYAPFKS+LPMVNPD+IVFGGWDISDMNLADAM RA+V DIDLQKQLRPYMESMVPLPGIY+PDFIAANQ
Sbjct:  102 FGSLTQSSSIRVGSFNGEEIYAPFKSLLPMVNPDEIVFGGWDISDMNLADAMGRAKVLDIDLQKQLRPYMESMVPLPGIYNPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 6.318e-42
Identity = 78/89 (87.64%), Postives = 87/89 (97.75%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGS+NGEE+YAPFKS++PMVNPDD+VFGGWDISDMNLADAM RA+V DIDLQKQLRPYME++VPLPGIYDPDFIAANQ
Sbjct:  102 FGSLTQASSIRVGSFNGEEMYAPFKSLVPMVNPDDVVFGGWDISDMNLADAMGRAKVLDIDLQKQLRPYMENIVPLPGIYDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.401e-41
Identity = 78/89 (87.64%), Postives = 87/89 (97.75%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVNP++IVFGGWDISDMNLADAMARA+V DIDLQKQ+RP+ME MVPLPGI+DPDFIAANQ
Sbjct:  102 FGSLTQASSIRVGSFNGEEIYAPFKSLLPMVNPEEIVFGGWDISDMNLADAMARAKVLDIDLQKQMRPFMEHMVPLPGIFDPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_DICDI (Inositol-3-phosphate synthase OS=Dictyostelium discoideum GN=ino1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.849e-26
Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = 3
Query:    3 FGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            FGS+  +S IR+G   NG + Y P K+++PMV+P+DIVFGGWDI++ NLADAM RA+VFD DLQ QL P+M+++ PLP IY PDFIAANQ
Sbjct:  101 FGSVVMSSTIRMGMDENGCDAYIPLKNLIPMVHPNDIVFGGWDINNANLADAMQRAQVFDYDLQVQLIPHMKNITPLPSIYFPDFIAANQ 190          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 3.721e-26
Identity = 54/89 (60.67%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            +GSL Q+S + +G  +  E++ PF+ +LPMVNP+D+VF GWDIS +NLADAM RA V D  LQ+QLRPYME M P P IY P+FIAANQ
Sbjct:   97 YGSLFQSSTVCLGRGSSGEVFVPFRDLLPMVNPNDLVFDGWDISSLNLADAMFRAEVLDWQLQEQLRPYMEKMKPRPSIYIPEFIAANQ 185          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.847e-25
Identity = 54/89 (60.67%), Postives = 67/89 (75.28%), Query Frame = 3
Query:    3 FGSLTQASAIRVGSYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            +GSL Q+S   +GS    +++ PF+ +LPMV+P+DIVF GWDIS +NLADAM RA V D  +Q+QLRPYME M P P IY PDFIAANQ
Sbjct:   97 YGSLFQSSTACLGSGPAGDVFVPFRDLLPMVHPNDIVFDGWDISSLNLADAMFRAEVLDWQIQEQLRPYMEKMKPRPSIYIPDFIAANQ 185          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.165e-25
Identity = 52/90 (57.78%), Postives = 69/90 (76.67%), Query Frame = 3
Query:    3 FGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            +GSLTQA  + +G   NG E++ PF ++LPMV P+D+VF GWDIS +NLA+AM RA+V D  LQ+QL P+MES+ P P +Y P+FIAANQ
Sbjct:   99 YGSLTQAGTVNLGLDENGREVFVPFSALLPMVAPNDLVFDGWDISSLNLAEAMRRAQVLDCGLQEQLWPHMESLRPRPSVYIPEFIAANQ 188          
BLAST of CF509782 vs. ExPASy Swiss-Prot
Match: INO1_BOVIN (Inositol-3-phosphate synthase 1 OS=Bos taurus GN=ISYNA1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.165e-25
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 3
Query:    3 FGSLTQASAIRVG-SYNGEEIYAPFKSILPMVNPDDIVFGGWDISDMNLADAMARARVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQ 269
            +GSLTQA  + +G    G+E++ PF S+LPMV PDD+VF GWDIS +NLA+AM RA+V D  LQ+QL P+ME+M P P +Y P+FIAANQ
Sbjct:   99 YGSLTQAGTVSLGLDAEGKEVFVPFSSLLPMVAPDDLVFDGWDISSLNLAEAMRRAQVLDWGLQEQLWPHMEAMRPRPSVYIPEFIAANQ 188          
The following BLAST results are available for this feature:
BLAST of CF509782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_HORVU2.171e-4291.01Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1_SESIN2.836e-4289.89Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_SPIPO3.704e-4289.89Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_BRANA6.318e-4287.64Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH2.401e-4187.64Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO1_DICDI2.849e-2662.22Inositol-3-phosphate synthase OS=Dictyostelium dis... [more]
INO1B_XENLA3.721e-2660.67Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA1.847e-2560.67Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_MOUSE9.165e-2557.78Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]
INO1_BOVIN9.165e-2558.89Inositol-3-phosphate synthase 1 OS=Bos taurus GN=I... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-290 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-81_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509782 ID=CF509782; Name=CF509782; organism=Citrus sinensis; type=EST; length=271bp
ATTTTGGTTCACTTACCCAAGCATCAGCAATTAGAGTTGGGTCTTACAAT
GGAGAGGAGATTTATGCTCCATTCAAGAGCATTCTCCCTATGGTGAACCC
AGATGACATTGTGTTTGGAGGATGGGACATTAGTGACATGAACTTGGCTG
ATGCCATGGCCAGGGCTAGAGTGTTTGATATTGATCTTCAAAAGCAACTT
AGGCCTTACATGGAATCAATGGTCCCACTTCCTGGAATCTATGACCCTGA
TTTCATTGCTGCCAATCAAGG
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