CF509788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC2_METTH (3-isopropylmalate dehydratase large subunit 2 OS=Methanobacterium thermoautotrophicum GN=leuC2 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.481e-27 Identity = 58/105 (55.24%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GAFG FATG+G TD V TGK VP +R + GE ++ AKD+IL IIGEI V GATY+S+EF G T+E + + RMT+CNM VE G K Sbjct: 124 VGADSHTCTYGAFGAFATGMGATDMAMVFATGKTWFMVPEAMRIEVTGEPEGHVYAKDVILHIIGEIGVDGATYRSVEFTGDTIESMDVSGRMTICNMAVEMGAK 228
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC1_METTH (3-isopropylmalate dehydratase large subunit 1 OS=Methanobacterium thermoautotrophicum GN=leuC1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.481e-27 Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +GTDSHTCT GA G FATGIG+TD V TGK+ +VP TLRF + G++ +++ AKD+IL IIG + GATY + EF G TV +S+ +RM L NM +E GGK Sbjct: 119 VGTDSHTCTHGALGAFATGIGSTDMAMVFATGKLWFRVPETLRFDVRGKLREHVYAKDVILNIIGRVGADGATYMACEFAGETVAEMSVSDRMVLSNMAIEMGGK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOPH (3-isopropylmalate dehydratase large subunit OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=leuC PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.934e-27 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD G + TGK KVP ++F+L GE +++ KD+IL IIG I V GA YKSMEFVG ++ L+M++R T+ NM +EAG K Sbjct: 120 IGADSHTCTYGALGAFSTGVGSTDMGAGMITGKAWFKVPAAIKFILTGEPKEWVSGKDVILHIIGMIGVDGALYKSMEFVGAGIKNLTMDDRFTIANMAIEAGAK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_DESVM (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=leuC PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.526e-27 Identity = 56/105 (53.33%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G FATG G+TD + G+ KVPPT+R G +P ++ AKDLIL++IGEI V GA Y+++EF G +E LS+E RMT+ NM +EAGGK Sbjct: 120 VGADSHTCTYGGLGAFATGFGSTDVAGAMALGETWFKVPPTIRATFTGTLPKWVGAKDLILRLIGEIGVDGALYRALEFDGAAIEALSVEGRMTIANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC5 (3-isopropylmalate dehydratase large subunit OS=Campylobacter curvus (strain 525.92) GN=leuC PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.309e-27 Identity = 54/105 (51.43%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD + + TGK KVPPT++ V G++ ++ KDLIL+II +I V GA YK++EF G T++ L M+ R ++CNM +EAGGK Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPPTIKVVFRGKLGRHVYGKDLILEIIRQIGVDGARYKALEFCGETIDALDMDGRFSMCNMAIEAGGK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOB8 (3-isopropylmalate dehydratase large subunit OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=leuC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 7.351e-27 Identity = 58/105 (55.24%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TGIG+TD + TGK KVP L+FVL + ++ KD+IL IIG I V GA YKSMEFVG ++ LSM++R T+ NM +EAGGK Sbjct: 120 IGADSHTCTYGALGAFSTGIGSTDMAAGMATGKCWFKVPSALKFVLKNKPAKWISGKDIILHIIGMIGVDGALYKSMEFVGDGLQYLSMDDRFTMANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC2_METAC (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina acetivorans GN=leuC2 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.600e-27 Identity = 52/105 (49.52%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G+DSHTC G+ G F+TGIG+TD V TGK+ +VP T RF ++G++P+ + +KDLIL +IG++ V GA Y + E+ G+T+ LS+ ERMT+ NM +E GGK Sbjct: 119 VGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKLWFRVPETFRFEVEGKLPERVYSKDLILHLIGDVGVEGARYMAAEYAGSTIRSLSIPERMTISNMAIEMGGK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_NITSB (3-isopropylmalate dehydratase large subunit OS=Nitratiruptor sp. (strain SB155-2) GN=leuC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.254e-26 Identity = 53/105 (50.48%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G FATG+G+TD + + TGK KVPP+++ + G++ +++ KDLIL++I I V GA YK++EF G T+E L M+ R +LCNM +EAG K Sbjct: 119 IGADSHTCTHGALGAFATGMGSTDLAYGMITGKNWFKVPPSIKVIYTGKLGEHVYGKDLILELIRRIGVDGALYKALEFTGDTIENLDMDGRFSLCNMAIEAGAK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_NAUPA (3-isopropylmalate dehydratase large subunit OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=leuC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.254e-26 Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD F + TGK K+P +++ V GE +++ KDLIL++I I V GA YK++EF G +E L M++RM+LCNM +EAG K Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDIAFCMITGKSWFKIPESIKVVFKGERGEHVYGKDLILELIRRIGVDGALYKALEFTGEVIENLPMDDRMSLCNMAIEAGAK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_DESVV (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=leuC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.254e-26 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G FATG+G+TD + G+ KVPPT+R G +P Y+ AKDLIL +IG I V GA Y+++EF G +E L +E RMT+ NM +EAGGK Sbjct: 120 VGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRATFTGTLPAYVGAKDLILTLIGAIGVDGALYRALEFDGAAIEALDVEGRMTMANMAIEAGGK 224 The following BLAST results are available for this feature:
BLAST of CF509788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509788 ID=CF509788; Name=CF509788; organism=Citrus sinensis; type=EST; length=318bpback to top |