CF509788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_DESVH (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=leuC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.254e-26 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G FATG+G+TD + G+ KVPPT+R G +P Y+ AKDLIL +IG I V GA Y+++EF G +E L +E RMT+ NM +EAGGK Sbjct: 120 VGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPTIRATFTGTLPAYVGAKDLILTLIGAIGVDGALYRALEFDGAAIEALDVEGRMTMANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_DESDG (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio desulfuricans (strain G20) GN=leuC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.638e-26 Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G FATG+G+TD + G+ KVPP++R G MP ++ AKDL+LQ+IG I V GA YK++EF G V+ +S+E RMT+ NM +EAGGK Sbjct: 120 VGADSHTCTYGGLGAFATGLGSTDVAGAMALGETWFKVPPSIRVSYRGTMPAHVGAKDLVLQLIGHIGVDGALYKALEFDGPVVDAMSVEGRMTIANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC1_METMA (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina mazei GN=leuC1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.638e-26 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSH+CT GAFG FATG+G TD + TGK+ KVP + R ++G + ++ AKDL L +IG+ +AGATYK++EF G + LS+ RMTLCNM +E G K Sbjct: 95 VGADSHSCTYGAFGAFATGVGATDMAEIFATGKLWFKVPESFRMTVEGSLDKHVYAKDLTLYLIGKTGIAGATYKAVEFYGQAISELSVAGRMTLCNMAIEMGAK 199
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC1_ARCFU (3-isopropylmalate dehydratase large subunit 1 OS=Archaeoglobus fulgidus GN=leuC1 PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 1.638e-26 Identity = 52/105 (49.52%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTC GA G FATGIG+TD GFVL GK+ KVP ++RF + G++ ++ KD++L++IG + GA YK+ + G VE+L M +R+T+CNM +E GGK Sbjct: 118 VGADSHTCMYGALGAFATGIGSTDMGFVLAMGKLWFKVPESIRFNVHGKLEKHVYGKDIVLKLIGMVGADGANYKACIYSGEVVEKLGMSDRLTMCNMAIEMGGK 222
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_THEYD (3-isopropylmalate dehydratase large subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=leuC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.139e-26 Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G FATG+G+TDA + TG+ KVP T++F+ G++ ++ KDLIL IG+I V GA+Y +MEF+G ++ + M R ++CNM +EAG K Sbjct: 120 IGADSHTCTYGALGAFATGVGSTDAAIAMATGECWFKVPETIKFIYYGKLQKWVSGKDLILYTIGDIGVDGASYMAMEFIGEVIDNMPMSGRFSMCNMAIEAGAK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC2_METMA (3-isopropylmalate dehydratase large subunit 2 OS=Methanosarcina mazei GN=leuC2 PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 2.793e-26 Identity = 51/105 (48.57%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G+DSHTC G+ G F+TGIG+TD V TGK+ +VP T RF ++G++P+ + +KDLIL +IG++ V G Y + E+ G+T+ LS+ ERMT+ NM +E GGK Sbjct: 119 VGSDSHTCAYGSLGAFSTGIGSTDMAAVFATGKLWFRVPETFRFEVEGKLPERVYSKDLILHLIGDVGVEGVRYMAAEYAGSTIRSLSIPERMTMSNMAIEMGGK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_DESAA (3-isopropylmalate dehydratase large subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=leuC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.765e-26 Identity = 54/105 (51.43%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G FATG+G+TD + TG+V LKVP +++FV G++ ++ KDLIL IG+I V GA Y +MEF G ++ L M ER+T+ NM +EAGGK Sbjct: 120 IGADSHTCTYGGLGAFATGVGSTDLAAAMITGEVWLKVPESIKFVYKGKLRPHVEGKDLILHTIGDIGVDGALYMAMEFTGEVIDALPMAERLTMANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOAB (3-isopropylmalate dehydratase large subunit OS=Clostridium acetobutylicum GN=leuC PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.765e-26 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD + TGK KVP ++FVL G+ ++ KD+IL IIG I V GA YKSME+ G +E LSM++R T+ NM +EAG K Sbjct: 122 IGADSHTCTYGALGVFSTGVGSTDMAVGMATGKAWFKVPEAIKFVLKGKPAKWVSGKDIILHIIGMIGVDGALYKSMEYTGDGLEYLSMDDRFTIANMAIEAGAK 226
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC1_METKA (3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri GN=leuC1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.765e-26 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G FATGIG+TD V TGK+ +VP T R + GE+P+ + AKD++L++ GEI GATY ++E+ G V +S+ +RM LCNM +E G K Sbjct: 118 VGADSHTCTHGALGAFATGIGSTDMAAVFATGKLWFRVPETYRVEITGELPEGVYAKDVVLKVTGEIGADGATYMAIEYHGEVVREMSVSDRMCLCNMAIEMGAK 222
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_DESDA (3-isopropylmalate dehydratase large subunit OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=leuC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.127e-26 Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G FATG+G+TD + G+ LKVP T+R + G+MP +L KDL+L +IG I V GA YK++EF G+ V+ LS+E R+++ NM +EAGGK Sbjct: 120 IGADSHTCTYGGIGAFATGMGSTDIAAGMALGETWLKVPSTIRVNISGDMPRWLRGKDLMLMLIGAIGVDGALYKALEFGGSVVDALSVEGRLSMANMAIEAGGK 224 The following BLAST results are available for this feature:
BLAST of CF509788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509788 ID=CF509788; Name=CF509788; organism=Citrus sinensis; type=EST; length=318bpback to top |