CF509788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOK5 (3-isopropylmalate dehydratase large subunit OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=leuC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.127e-26 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD + TG+ KVP ++FVL+G++ ++ KD+IL IIG I V GA Y SMEF G V LSM++R T+ NM +EAG K Sbjct: 120 IGADSHTCTYGALGAFSTGVGSTDMAAGMATGEAWFKVPEAIKFVLNGKLSPWVSGKDIILHIIGMIGVDGALYNSMEFTGEGVGELSMDDRFTIANMAIEAGAK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOBB (3-isopropylmalate dehydratase large subunit OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=leuC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.127e-26 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TGIG+TD + TG+ KVP ++F+L + ++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGK Sbjct: 120 IGADSHTCTYGALGAFSTGIGSTDMAAGMATGQTWFKVPSAIKFILKNKPAKWVSGKDIILHIIGMIGVDGALYKSMEFVGDGLNYLSMDDRFTMANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOBA (3-isopropylmalate dehydratase large subunit OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=leuC PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.127e-26 Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TGIG+TD + TG+ KVP ++F+L + ++ KD+IL IIG I V GA YKSMEFVG + LSM++R T+ NM +EAGGK Sbjct: 120 IGADSHTCTYGALGAFSTGIGSTDMAAGMATGQTWFKVPSAIKFILKNKPAKWVSGKDIILHIIGMIGVDGALYKSMEFVGDGLNYLSMDDRFTMANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CALS8 (3-isopropylmalate dehydratase large subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=leuC PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.061e-25 Identity = 55/105 (52.38%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TGIG+TD + TGK KVP ++FVL G+ + KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG K Sbjct: 122 IGADSHTCTYGALGAFSTGIGSTDMACAMATGKCWFKVPEAIKFVLYGKKTGWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAK 226
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ANATD (3-isopropylmalate dehydratase large subunit OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=leuC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.386e-25 Identity = 54/105 (51.43%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TGIG+TD + TGK KVP ++F+L G+ + KD+IL IIG I V GA YKSME+ G ++ LSM++R T+ NM +EAG K Sbjct: 122 IGADSHTCTYGALGAFSTGIGSTDMACAMATGKCWFKVPEAIKFILYGKKTGWTSGKDIILHIIGMIGVDGALYKSMEYTGEGLKSLSMDDRFTIANMAIEAGAK 226
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_HYDS0 (3-isopropylmalate dehydratase large subunit OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=leuC PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.811e-25 Identity = 49/105 (46.67%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G F+TG+G+TD + + TG++ LKVP +++F+ G++ ++ KDLIL IG+I V GA Y++MEF G + L + +R+T+ NM +EAGGK Sbjct: 119 VGADSHTCTYGGIGAFSTGVGSTDLAYAMATGEIWLKVPESMKFIFYGKLNKWVSGKDLILYTIGQIGVDGALYRAMEFDGEAIRSLDVSQRLTIANMAIEAGGK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CAMC1 (3-isopropylmalate dehydratase large subunit OS=Campylobacter concisus (strain 13826) GN=leuC PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.811e-25 Identity = 51/105 (48.57%), Postives = 75/105 (71.43%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD + + TGK KVP +++ V G++ ++ KDLIL+II +I V GA YK++EF G ++ LSM++R ++CNM +EAG K Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPESIKVVFKGKLDKHVYGKDLILEIIRQIGVDGALYKALEFSGEVIDGLSMDDRFSMCNMAIEAGAK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC1_METAC (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina acetivorans GN=leuC1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.811e-25 Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSH+CT GAFG FATG+G TD + TGK+ KVP + R ++G + + AKDL L +IG+ +AGATYK++EF G + L++ RMTLCNM +E G K Sbjct: 128 VGADSHSCTYGAFGAFATGVGATDMAEIFATGKLWFKVPESFRMTVEGSLRKGVYAKDLTLYLIGKTGIAGATYKAVEFYGQAIRELTVAGRMTLCNMAIEMGAK 232
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC2_ARCFU (3-isopropylmalate dehydratase large subunit 2 OS=Archaeoglobus fulgidus GN=leuC2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.033e-25 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT G G F+TG+G+TD + GK +VP + R LDG +P + AKD+IL++IG++ V GATYK++EF G E +++EER+T+ NM VE G K Sbjct: 115 VGADSHTCTYGGIGAFSTGMGSTDVAVAIALGKNWFRVPESFRVQLDGSLPKGVFAKDVILKLIGDLGVDGATYKALEFHGECAENMTVEERLTIANMAVECGAK 219
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_SULDN (3-isopropylmalate dehydratase large subunit OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.268e-25 Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD F + TG KVP +++ L G+ Y KD+IL+II I V GA YK++EF G+T+E LS+++R ++CNM +EAG K Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDLAFAMITGGNWFKVPESIKVNLSGKPSKYTTGKDIILEIIRLIGVDGALYKTLEFTGSTIEHLSIDDRFSMCNMAIEAGAK 223 The following BLAST results are available for this feature:
BLAST of CF509788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509788 ID=CF509788; Name=CF509788; organism=Citrus sinensis; type=EST; length=318bpback to top |