CF509788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_MOOTA (3-isopropylmalate dehydratase large subunit OS=Moorella thermoacetica (strain ATCC 39073) GN=leuC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.268e-25 Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G FATG+G+TD + TG++ KVP T+ F G++ ++ KDLIL IG I V GA Y +MEF G + LSME R T+ NM +EAGGK Sbjct: 120 IGADSHTCTYGALGAFATGVGSTDLAAAMATGELWFKVPETILFRYHGKLKPWVGGKDLILYTIGRIGVDGARYMAMEFTGEAITNLSMEGRFTMANMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_THEP3 (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=leuC PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.880e-25 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G + ++ KD+IL IIG+I V GA YKSMEF G ++ LSM++R T+ NM +EAG K Sbjct: 119 IGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNLQKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSMDDRFTIANMAIEAGAK 222
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CLOTH (3-isopropylmalate dehydratase large subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=leuC PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.880e-25 Identity = 54/105 (51.43%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TGIG+TD + TG+ KVP ++FVL G+ ++ KD+IL IIG I V GA Y+SMEF G V LSM++R + NM +EAG K Sbjct: 120 IGADSHTCTYGALGAFSTGIGSTDMAAGMATGEAWFKVPEAMKFVLKGKPGKWVSGKDIILHIIGMIGVDGALYRSMEFTGDGVAHLSMDDRFAMANMAIEAGAK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_THETN (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter tengcongensis GN=leuC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.174e-24 Identity = 54/105 (51.43%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA FATG+G+TD + TGK KVP ++FVL G + ++ KD+IL IIG+I V GA YKSMEF G ++ LS+++R T+ NM +EAG K Sbjct: 119 IGADSHTCTYGALTCFATGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNLGKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSIDDRFTIANMAIEAGAK 222
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_CAMFF (3-isopropylmalate dehydratase large subunit OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=leuC PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.533e-24 Identity = 51/105 (48.57%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD + + TGK KVP T++ G+ ++ KDLIL++I +I V GA YK++EF G ++ L M+ R +LCNM +EAGGK Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDLAYAMITGKNWFKVPATIKVEFVGKPAKHIYGKDLILEVIRQIGVDGALYKALEFCGDAMKYLDMDSRFSLCNMAIEAGGK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_UNCTG (3-isopropylmalate dehydratase large subunit OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=leuC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24 Identity = 52/105 (49.52%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG G+TD + TGK+ KVP +++F+L+ ++ ++ KD+IL IIG I V GA Y SMEF G ++L+M +R T+ NM +EAGGK Sbjct: 120 IGADSHTCTYGALGAFSTGGGSTDIAAAMATGKIWFKVPNSIKFILNRKLNKWVSGKDIILYIIGLIGVDGALYNSMEFDGPLCKKLTMADRFTITNMAIEAGGK 224
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_THEPX (3-isopropylmalate dehydratase large subunit OS=Thermoanaerobacter sp. (strain X514) GN=leuC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24 Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA F+TG+G+TD + TGK KVP ++FVL G + ++ KD+IL IIG+I V GA YKSMEF G ++ LS+++R T+ NM +EAG K Sbjct: 119 IGADSHTCTYGALTCFSTGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNLQKWVSGKDVILYIIGKIGVDGALYKSMEFTG-NIKALSIDDRFTIANMAIEAGAK 222
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_SULNB (3-isopropylmalate dehydratase large subunit OS=Sulfurovum sp. (strain NBC37-1) GN=leuC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24 Identity = 49/105 (46.67%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD F + TG KVP T++ VL G+ +++ KD+IL++I + V GA YK++EF G ++ L+M++R ++CNM +EAG K Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDLAFGMITGGNWFKVPETIKVVLTGKSGEHIYGKDIILELIRILGVDGALYKALEFTGDAIQHLAMDDRFSMCNMAIEAGAK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ARCB4 (3-isopropylmalate dehydratase large subunit OS=Arcobacter butzleri (strain RM4018) GN=leuC PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.002e-24 Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD F + TG KVP +++ + G+ ++ KDLIL+II + V GA YK++EF G T++ LSM++R +LCNM +EAG K Sbjct: 119 IGADSHTCTHGALGAFSTGMGSTDISFGMITGGNWFKVPESIKVIFKGKPAPFVTGKDLILEIIRILGVDGALYKALEFTGDTIQYLSMDDRFSLCNMAIEAGAK 223
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_HELHP (3-isopropylmalate dehydratase large subunit OS=Helicobacter hepaticus GN=leuC PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 2.614e-24 Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 +G DSHTCT GA G F+TG+G+TD + TG+ KVP ++F L G++ Y+ KD+IL IIG+I V GA YKSMEF G ++ L++++R+ + NM +EAG K Sbjct: 120 IGADSHTCTYGALGAFSTGVGSTDMAVGMATGQAWFKVPYAIKFNLKGKLRPYVSGKDVILHIIGKIGVDGALYKSMEFGGEGLKNLTIDDRLCIANMAIEAGAK 224 The following BLAST results are available for this feature:
BLAST of CF509788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509788 ID=CF509788; Name=CF509788; organism=Citrus sinensis; type=EST; length=318bpback to top |