CF509788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_BACFR (3-isopropylmalate dehydratase large subunit OS=Bacteroides fragilis GN=leuC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GA G A GIG ++ VL + +L P T+R +DG++ + AKD+ L ++ +++ +GAT +E+ G + L+ME R+TLCN+ +E G + Sbjct: 127 DSHTSTHGAMGAVAFGIGTSEVEMVLASQCILQSRPKTMRITVDGKLGKGVTAKDIALYMMSKMTTSGATGYFVEYAGEAIRSLTMEGRLTLCNLSIEMGAR 228
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_BACFN (3-isopropylmalate dehydratase large subunit OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=leuC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GA G A GIG ++ VL + +L P T+R +DG++ + AKD+ L ++ +++ +GAT +E+ G + L+ME R+TLCN+ +E G + Sbjct: 127 DSHTSTHGAMGAVAFGIGTSEVEMVLASQCILQSRPKTMRITVDGKLGKGVTAKDIALYMMSKMTTSGATGYFVEYAGEAIRSLTMEGRLTLCNLSIEMGAR 228
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ARTCA (3-isopropylmalate dehydratase large subunit OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=leuC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ V+ T + LK T+ ++G + + AKD+IL +I +I G +E+ G+ + LSM+ RMT+CNM +EAG + Sbjct: 133 DSHTSTHGAFGALAMGIGTSEVEHVMATQTLSLKPFKTMAINVEGTLRPGVTAKDIILAVIAKIGTGGGQGYVLEYRGSAIRALSMDARMTICNMSIEAGAR 234
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ARTAT (3-isopropylmalate dehydratase large subunit OS=Arthrobacter aurescens (strain TC1) GN=leuC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ V+ T + LK T+ ++G + + AKD+IL +I +I G +E+ G+ + LSM+ RMT+CNM +EAG + Sbjct: 133 DSHTSTHGAFGALAMGIGTSEVEHVMATQTLSLKPFKTMAINVEGTLRPGVTAKDIILAVIAKIGTGGGQGYVLEYRGSAIRALSMDARMTICNMSIEAGAR 234
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ACAM1 (3-isopropylmalate dehydratase large subunit OS=Acaryochloris marina (strain MBIC 11017) GN=leuC PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG + GIG + VL + + L + ++G +P + AKD+IL II + V G + EF GTT E+++M+ERMT+CNM +E G + Sbjct: 129 DSHTSTHGAFGAISFGIGTSQVRDVLASQTLALAKLKVRKVEVNGTLPAGVYAKDVILHIIRTLGVKGGVGYAYEFAGTTFEQMTMDERMTVCNMSIEGGAR 230
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC1_DEIRA (3-isopropylmalate dehydratase large subunit 1 OS=Deinococcus radiodurans GN=leuC1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.301e-15 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 2 Query: 2 LGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 LG+DSH+ T GA F +G+G TD +GK L+VP +++ L G++ + AKD+ L++I + GATY+S+E +R + ERMTL N+ VEAG K Sbjct: 133 LGSDSHSTTYGAVAAFGSGMGATDIALAAASGKTWLRVPESVKVTLTGDLRPGVTAKDVALEMIRVLGADGATYQSVEI--HAGDRFTRGERMTLANLCVEAGAK 235
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_SALRD (3-isopropylmalate dehydratase large subunit OS=Salinibacter ruber (strain DSM 13855) GN=leuC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.699e-15 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG GIG + VL T + ++ R +DG + + + AKD+IL+IIGE+ V G E+ G ++ LSME RM++CNM VE G + Sbjct: 129 DSHTSTHGAFGTLGFGIGTSQIRDVLATQCIAMEKQDVRRIQVDGALGEGVYAKDIILKIIGELGVEGGIGYVYEYGGPAIKGLSMEGRMSICNMSVEGGAR 230
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_BLOPB (3-isopropylmalate dehydratase large subunit OS=Blochmannia pennsylvanicus (strain BPEN) GN=leuC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.699e-15 Identity = 45/100 (45.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAG 310 DSHT T GAFG A GIG ++ VL T + +++ L G + + AKD+IL IIG+I G + +EF G + LSMEERMTLCNM +E G Sbjct: 128 DSHTATHGAFGALAFGIGTSEIEHVLATQTLQQIRYKSMQINLSGIIAPQITAKDIILAIIGKIGHGGGSGHVVEFCGPIITLLSMEERMTLCNMAIEMG 227
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ACIBT (3-isopropylmalate dehydratase large subunit OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=leuC PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.699e-15 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG + + KD++L IIG+I AG T ++EF G +S+E RMT+CNM +EAG + Sbjct: 134 DSHTATHGAFGCLAHGIGTSEVEHVLATQCLVQKKSKNMLVRVDGVLGKGVTPKDVVLAIIGKIGTAGGTGYAIEFGGQVFRDMSIEGRMTVCNMAIEAGAR 235
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ACIBC (3-isopropylmalate dehydratase large subunit OS=Acinetobacter baumannii (strain ACICU) GN=leuC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.699e-15 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG + + KD++L IIG+I AG T ++EF G +S+E RMT+CNM +EAG + Sbjct: 134 DSHTATHGAFGCLAHGIGTSEVEHVLATQCLVQKKSKNMLVRVDGVLGKGVTPKDVVLAIIGKIGTAGGTGYAIEFGGQVFRDMSIEGRMTVCNMAIEAGAR 235 The following BLAST results are available for this feature:
BLAST of CF509788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509788 ID=CF509788; Name=CF509788; organism=Citrus sinensis; type=EST; length=318bpback to top |