CF509788
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_AGRT5 (3-isopropylmalate dehydratase large subunit OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=leuC PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 5.102e-20 Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG++P+ + AKD+IL IIGEI AG T +EF G + LSME RMT+CNM +E G + Sbjct: 131 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGKLPESVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRSLSMEGRMTVCNMTIEGGAR 232
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_PICTO (3-isopropylmalate dehydratase large subunit OS=Picrophilus torridus GN=leuC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.664e-20 Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 2 Query: 5 GTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 G DSHT T GA + GIG+T+AG + GTG++ KVP T ++G + KD+IL ++ I G+ YK MEF G+T++ L + ERMT+ NM EAG K Sbjct: 116 GADSHTNTYGALSCVSVGIGSTEAGVIFGTGRMWFKVPETDLIRINGRPKKGVYGKDIILNVLSRIGNGGSAYKCMEFTGSTIDYLDINERMTMANMTTEAGAK 219
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_BURP8 (3-isopropylmalate dehydratase large subunit OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=leuC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.664e-20 Identity = 48/102 (47.06%), Postives = 66/102 (64.71%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T +L K + ++G++P AKD++L IIG+I AG T ++EF G+T+ LSME RMT+CNM +EAG + Sbjct: 128 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLLQKKSKNMLVKVEGQLPHGCTAKDIVLAIIGKIGTAGGTGYAIEFGGSTIRALSMEGRMTVCNMAIEAGAR 229
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_RHISN (3-isopropylmalate dehydratase large subunit OS=Rhizobium sp. (strain NGR234) GN=leuC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.703e-20 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T +EF G + LSME RMT+CNM +E G + Sbjct: 131 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRSLSMEGRMTICNMTIEGGAR 232
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_RHILW (3-isopropylmalate dehydratase large subunit OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=leuC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.703e-20 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG +P ++ AKD+IL IIGEI AG T +EF G + LSME RMT+CNM +E G + Sbjct: 131 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGLLPPHVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRSLSMEGRMTICNMTIEGGAR 232
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_ACIBL (3-isopropylmalate dehydratase large subunit OS=Acidobacteria bacterium (strain Ellin345) GN=leuC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.703e-20 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG FA GIG ++ VL T + + P T++ + G +P+ + AKDL L IIG++ GAT +E+ GT + LSME RMTLCNM +E G + Sbjct: 130 DSHTSTHGAFGAFAFGIGTSEVEHVLATQCLPQRKPKTMKIEVSGTLPEGVTAKDLALGIIGKLGTDGATGHVIEYCGTAIRALSMEARMTLCNMSIEGGAR 231
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_SINMW (3-isopropylmalate dehydratase large subunit OS=Sinorhizobium medicae (strain WSM419) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.137e-19 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T +EF G + LSME RMT+CNM +E G + Sbjct: 131 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRSLSMEGRMTVCNMTIEGGAR 232
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_RHIME (3-isopropylmalate dehydratase large subunit OS=Rhizobium meliloti GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.137e-19 Identity = 48/102 (47.06%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K + +DG++P + AKD+IL IIGEI AG T +EF G + LSME RMT+CNM +E G + Sbjct: 131 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPPGVTAKDIILAIIGEIGTAGGTGHVIEFAGEAIRSLSMEGRMTVCNMTIEGGAR 232
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_NITHX (3-isopropylmalate dehydratase large subunit OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=leuC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.137e-19 Identity = 48/102 (47.06%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ K +R V+ G +PD + AKD+IL IIGEI AG T +E+ G + L+ME RMT+CNM +E G + Sbjct: 130 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVYGTLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGEAIRALTMEGRMTVCNMSIEGGAR 231
BLAST of CF509788 vs. ExPASy Swiss-Prot
Match: LEUC_MESSB (3-isopropylmalate dehydratase large subunit OS=Mesorhizobium sp. (strain BNC1) GN=leuC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.485e-19 Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 11 DSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMTLCNMVVEAGGK 316 DSHT T GAFG A GIG ++ VL T ++ + + +DG++PD + AKD+IL IIGEI AG T +E+ G + LSME RMT+CNM +E G + Sbjct: 131 DSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQRKAKNMLVQVDGKLPDGVTAKDIILAIIGEIGTAGGTGHVIEYAGEAIRSLSMEGRMTVCNMSIEGGAR 232 The following BLAST results are available for this feature:
BLAST of CF509788 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509788 ID=CF509788; Name=CF509788; organism=Citrus sinensis; type=EST; length=318bpback to top |